SimpleSearch - Line and FST details


Line specific information

 
Line ID 321G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N430801)
Segregation Analysis 50:46:31
Confirmed for Hit At1g62190
Parent of DUPLO pair none
Parent of pair(s) 97081, 97082

Gene hit At1g62190

 
Sequence (A. th genome BLAST matches underlined) 
>71-K015945-022-321-G09-8409
TGATCTGTAATTTCCCGGACTGAAGCATTTACATTGAATATATCCTGATGTCCATGGAAC
AAAGTTTTGGACGAAAGTAACTTATTTAAGGCATTGGAGATGGCGTTGTTTTTCCAGTTC
GGTGTGAGACCAAACTCGTGGAACGAGCCAAACTCTGACTGGACAGAAGAAACCGAGACT
AATTTCTTTACAAAGATTTAAAGAATATCTGAATATGTATGAGTGTGTCGAATAAAGAGC
ATGTATTAGGTTTAAGTATCAGATCTTGTAAGCTGATTAAACCTCCATTGTTGATGATCT
TTCGTAAGCATGCAAACTTCAATAACCTGAACTACTACTTTTTACAAATAACCTTTCTAT
GGGATCTCCCTAAATAGTGAGANNAANNTNNANANANNNNNNTNNNNTTTTTTCCCTTTA
ATTAGTTAGAAGGACCACCCATTATTTAAAAACCTCTCCCCCCTACTTCCCCCCAATACT
ACCTTCTCTCACCCATACCCCAACACAAATTACCCCTCACAACAACACTTAACCCACAAC
ACCTCCCTCCCTCATCTCCTTCCCCCCCCCTTCNNCCCAGCTATCCAATAAACCCACCCA
TCCCCCCCTAATTATCATACTCACCACCCACCCTTCTCTCCCCAAACCCCCACTACCACA
CTCTAAATCTATCTCCCCCCAAAAACTNACTCAACCTCAGCCCCCAACCCCTATATTAAA
ACTACCCACCCAAACTATTCAAATCCA
GenBank Accession AL949583 [GenBank]
Graphic View Graphic view of gene At1g62190
Predicted Position of Insertion Chr1:22981715 - go to primer design
BLAST e Value 5e-173
Hit Clone Code (BAC ID) F19K23
Hit Gene Code At1g62190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37