SimpleSearch - Line and FST details


Line specific information

 
Line ID 323F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N430981)
Segregation Analysis 50:41:32
Confirmed for Hit At3g47720
Parent of DUPLO pair 12535
Parent of pair(s) none

Gene hit At3g47720

 
Sequence (A. th genome BLAST matches underlined) 
>70-K015947-022-323-F09-8409
TGTCATGAAATTTCCCGGACATGAAGCCATTTACAATTGACTCGCTGGTAGCGGTGGTAA
GTTTGATAGCTAGCATCTGATTCACGCGCAGAAAAAAAGGATCTCAAGAAGATCCGTTGA
CCTTATCTACAGGGACGGACGCGCGGTGGAACGAGCAATCAGCGCTAAGGGATCTTGGTC
ATGAGATTATTAAAAAGGATCTTCTCCTATTTGACGACTCGATAGAAATGTATTATTTTG
TACACCATGCATGATCACTGATGGGGTGCCTGCTTTGGGACGCACTGCACGCGTAGATGC
ATCTACCACGATGGGCATTTCATCTCTCGAAATGGTGGGATCCTCACTACCCAACTTCCT
TTGCTGATATCTTCATAATAAAGTGACAGATAGATGGGCAAATGCCATCCGGATGACGGT
TCCCGGGTATTACTCAACTCCAGATCAGACTTTATTGCTCTTTGCGCATCTGAGACTCGT
TCATGGCACTATTTGGAAGATACAGGGATGCCACGTCTCCCGAGGTCTCAGAATACATTC
TTCTCGTCATAGATTCGCAATATCGCCTTCTATTGGCTAGTCACACAGTCTTGACAGTCT
ACGCTCTGTTAGTTCCTCTCATCGGATGATTAGACTCACTGGGAGATAGCTGATTCGCTA
CGATATCTACCCCTTGGTGGAGAAAAGGGAAATAAAAAACCCTTGAATACAAACCATTTC
TGGTTTTGTTTCTCATACATACTTTCCCAAAGGCTGGGTCCTCCGATATGTTTCTTCCGA
TAAATGGACCGGCCCAACCGGGGCTAAACGCATCGATATAAGAAGTAGTCGTTTATT
GenBank Accession FR807899 [GenBank]
Graphic View Graphic view of gene At3g47720
Predicted Position of Insertion Chr3:17593319 - go to primer design
BLAST e Value 3e-17
Hit Clone Code (BAC ID) T23J7
Hit Gene Code At3g47720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation similar to RCD one 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37