SimpleSearch - Line and FST details


Line specific information

 
Line ID 324A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N431011)
Segregation Analysis 50:46:45
Confirmed for Hit At5g38420
Parent of DUPLO pair none
Parent of pair(s) 84351, 84353, 84355

Gene hit At5g38420

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015976-022-324-A03-8409
TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATGCCTGAATGAACTACA
GTTCAGTGTAGACCATTACCTTATCATAGATGTGCTCCACCATGCTATGGGATCANCCCT
ATAATGCGATCTTACCTCCCTGACCTTAGCGACTATGACTTGGTTAAGGAAGTGGACTAC
CTTCTCCGCAACAAGTGGATTCCTTGTGTTGAATTCAAGTAAGGAGGTAACATACACTGA
ACTTTTCCTTTGACTCTAAGCATCCTTTATTCTTCATCTTCATTGCTATGGGATCCTCAC
CTATAATGAGACCATTACTTCTTCTTGTTGTTTCTCTTCTTCTTTTGGTTTTTCTCTTAC
TTACTTGTTTGTCTGTTGGTTTTGTCATCTTTATATAGTGGGAACCGCTATGGGATCCTC
CTTATAGTG
GenBank Accession AL949852 [GenBank]
Graphic View Graphic view of gene At5g38420
Predicted Position of Insertion Chr5:15381749 - go to primer design
BLAST e Value 3e-54
Hit Clone Code (BAC ID) MXI10
Hit Gene Code At5g38420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribulose bisphosphate carboxylase (small chain) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL949852 [GenBank]


Last Updated on 10.06.2021 13:37