SimpleSearch - Line and FST details
Line specific information
| Line ID | 324H01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431093) |
| Segregation Analysis | 50:36:25 |
| Confirmed for Hit | At1g71770 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 556, 3314, 92612, 92613 |
Gene hit At1g71770
| Sequence (A. th genome BLAST matches underlined) | >08-K015976-022-324-H01-8409 TGTCCTGTAATTTCCCGGACATGAAGCCTTTACATTGAAAATATTTCATTGCCAAAGATT AAAGAGTGGAACTTGAGGGTAAAACAGATTTATATGAGAAGATTTTGTATTCAATATATA TCTATGCTTCATTTACAAGTAATTATATTTCCTTTTTATACAAAATATGAAAGGGATTGT AGTCCATCTTCAAAATTTGAATGATGACTCTATGGGATCCCCNCTATAGTGAGANNGGAA NGGATGCTTACTCCCCTCCTGAATATCCTTTATTAACTGTAAGTGTCCACTGAATTGACA AACTTTTTACATATACATAAATGTTTTATAAAATTGGTACTAAAATGTTCATTGGGGTTG ATGATTACGCAGATGAAAGAAATGAATGGGAAGATGATAGGAAGGAAACCTCTTTACGTT GCTTTGGCACAACGTAAGGAAGAAAGACAGGCTCACCTTCAGGTTCTTTTTAGCCCTCTC ACTCTTTGAACATCAAACTCTGTACTGTGTTGTGTTGTGACACTGAGTTCTTAAACTGTC TTGATGTTTTCACGTGTTTCAGAGTCTATTTACTCAAATCAGATCACCTGGAACAATGTC ACCAGTTCCATCCCCGATGTCTGGGGTTCATCCTCACCCACCAGGTGGGGCCCATGTCCG GACCACCCCATCCAATGTTCATAGGCCATAACGGTCAAGTTTGGGACCTTCCCAGCCTAT GGGGGAATGGGTACCAAGTTCCGTTCCTGCCCTGGGAAGGCTCCAAGGGGAGGCCCCCCT AACTTCATGAAGCCTTTCCCTCCTTCAAGGGAAATCCGCCTGGCCCTCGGGTGGGGTCAG GGCTGGGGCTAAAAACATGCAGCACACGTTTCACAACAAAAGGAAAGGTTTT |
| GenBank Accession | AL949969 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:26992251 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F14O23 |
| Hit Gene Code | At1g71770 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | poly(A)-binding protein 5 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F6P23
| Sequence (A. th genome BLAST matches underlined) | >08-K015983-022-324-H01-8409 TGTCCTGTAATTTCCCGGACATGAAGCCTTTACATTGAAAATATTTCATTGCCAAAGATT AAAGAGTGGAACTTGAGGGTAAAACAGATTTATATGAGAAGATTTTGTATTCAATATATA TCTATGCTTCATTTACAAGTAATTATATTTCCTTTTTATACAAAATATGAAAGGGATTGT AGTCCATCTTCAAAATTTGAATGATGACCCTATGGGATCTCNCCTATAGTGAGAATGAAA GGGATGGGAACCCCTCTTCTAAATTTCAATGATGACCCTATGGGATCCTCCCTATAGTGA GANNNNNNACNNNNNCTNTTTTGCCTTATCGAGCGGAACGAAAATGTTCATCTGGGGCTG ATGATCACGCGGATGAAAGACCTGAACGCGAAGATGATAGGAACGAAACCTCTCTTCGTT GCTTTGGCGCGACACAAAGAAGAAAGACAGGCTCACCTTCAGGGTCTTTTTAGCCCTCCC CCTCTCGGAACAGCGAACTCTGTACTGTGCTGGGGTGTGACACCCCGTTCCTAAACTGCC CTGATGTTT |
| GenBank Accession | AL949970 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:7409757 - go to primer design |
| BLAST e Value | 2e-92 |
| Hit Clone Code (BAC ID) | F6P23 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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