SimpleSearch - Line and FST details


Line specific information

 
Line ID 325A04
Vector Used pAC161
Line Availability available as T3 set from NASC (N431108)
Segregation Analysis 50:50:46
Confirmed for Hit At4g39660
Parent of DUPLO pair none
Parent of pair(s) 3101, 3303

Gene hit At4g39660

 
Sequence (A. th genome BLAST matches underlined) 
>25-K015977-022-325-A04-8409
TGTCCTGAAATTTCCCGGACTGAAGCCATTTACATTGATTATTGCTACTGGAGTAGGAGG
ATCACATGCTTATAAGAAATGCTGACGCAGTATAATATGATTCTCAAGATGCATATTCCT
ACTTGCATTATTATTCCATTCTGATGAGAGTGCTGATGAACCGACCGACAGAGACACTGT
AACGAATCTCTTCCGATTATCATCTGCTAGTTATGATGACGCGTCTCTGACTAAGGCGAT
ATGTCTTATAACGAGCGTCCGCATCACCTGAAGTATATATATTTGGTGAAACTGGAAAGA
TCACAAATTACTCTCTATGGGATCCCCCNTTGTAATGAGGTTATATTGATTTTGGCGATC
GCGATTTATCAGTACGCAATCGGGGATTTCAAATTTGTAGATGTGATTTTCGATCGATTC
ATTAGCTCCCGAAGACTAAGAGGATTTGTGGACTTAGAAGCCAGCTTGATGATCCATGGA
TCTCTGATTATTCAGTGCTGATGTTATGTTGCAGCTTAACATCGTTGAAGGGAAGATGCA
GTACTTGTATGATGAGAGTGGCAGGCGATATCTGGATGCCTTTGCTGGAATAGACACTGT
GTCGCGCGGTCACTGCCATCCGGATATTCTTAATGCGATTACGGAACAGAGCAAGCTACT
TCAGCACGCGACTACTATTTACCTGCATCATGCCATTTGGTGATCTTGCTGAAGCATTGG
CTGGCAAGATGCCCCNAAATCTTAAGGTACCTTGAGAGTTTTAAACCACCGAGTCTGAAT
GGATGTAAGTAGGCCTCCCCTGGTGGGTTTATCGAGGATCAGCATGCTCTATGATTGGGA
TGCAGGGTGTGTACTTTG
GenBank Accession AL949986 [GenBank]
Graphic View Graphic view of gene At4g39660
Predicted Position of Insertion Chr4:18406805 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F23K16
Hit Gene Code At4g39660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alanine:glyoxylate aminotransferase 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL949987 [GenBank]


Last Updated on 10.06.2021 13:37