SimpleSearch - Line and FST details


Line specific information

 
Line ID 325C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N431129)
Segregation Analysis 50:41:27
Confirmed for Hit At3g45590
Parent of DUPLO pair 7922
Parent of pair(s) none

Gene hit At3g45590

 
Sequence (A. th genome BLAST matches underlined) 
>03-K015977-022-325-C01-8409
TGATCTGAGATTTCCCGGACTGAAGCCATTTACATTGAATATATTCGTCATTTCTTTGGA
TATATTTTGGAATACGCCGTTCTTGTTCATGCCATTGGCGGGAATGATGGGTTATAGGTG
TGGACCGATATCCTTTGCATCGTTCTACTAACCGGAAGCGTCTCGAGATCCTGGTTGGGT
CTTTACGGCTACTTAAAAGTCACTGCACATAAGATGAATCTGCCTTAGTGTTGAGAGGAC
TACACTTTTGAAGAGGGGACCATACATACATGGAGTTCACAACTTAGCCGTGAAGATGAA
ACCAGAACATGATTAAGCTTACCTGTTTACAAGTCTTGTTGTAATGCTGATTTCTATGGG
ATCCTCCCTATAAGGAGATCCCGACTCGAAAAAGTTCTGCTTTCCTTCAACTCATTACAA
TCAAAATTGAGATTAGGGCTCCTATCTATTTCTTTGATTCCGCCCAGCTATGGGATCCCG
ATGCCTAATGGAGTACTGACGTCTCCACCCCGCGGCCCGGCTTACCTACTTGTGTCCTAC
CCGCCACCCGCCCGCCCCTGCACCCCCCCCGCTCCGTACTGTCGAACGAACCGCTTTCCA
AAGACCACGTTCGTGGCCCCCTCCCGCTACTGGCCCCGCGGCCGCCACC
GenBank Accession AL950019 [GenBank]
Graphic View Graphic view of gene At3g45590
Predicted Position of Insertion Chr3:16733522 - go to primer design
BLAST e Value 9e-73
Hit Clone Code (BAC ID) F9K21
Hit Gene Code At3g45590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation splicing endonuclease 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL950020 [GenBank]


Last Updated on 10.06.2021 13:37