SimpleSearch - Line and FST details
Line specific information
| Line ID | 325E04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431156) |
| Segregation Analysis | 75:65:47 |
| Confirmed for Hit | At3g12690 At2g41040 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4388, 7299, 93907, 93908 |
Gene hit At3g12690
| Sequence (A. th genome BLAST matches underlined) | >29-K015977-022-325-E04-8409 GCCATTTACATTGTGCAACGTGGCTCTGTTTCCCTGCCCCTTGCACGGGGTGGTCCCATG GAGGAGCTCATAAAGGAAGATCCCGAATGTCCACCAGTCCACAGCGCTGCCATGTCCCTC GCCACGTATGATCTCTGGAGCTATGGGATCTCCCCTATAGTGAGATCCCTATANTGAGAN NTGNNCTTNCTTTTTATACATTGCTGGAATCTCAGGATCCTTCCAAACGGGCCGACCGCC TGTGGGACCCTCTTTGGGACGCACAGTCGGCATAAGCATCTTCAACAATGGCCTTTCCTT TATCGCAATGATGAGATTTGTAGGAGCCACCTTCCTTTTCCACTATCTTCACAATAGAAG GACAGATATCTGGGCAATGGAATCCGATGAGGTTTCCCTATATTACCCTTTGTTGAAAAG ACTCAATTGCCCTTTGGTCTTCTGAGACTGTATCTTAGATATTTTTCGAATAGACAAACT AGTCTTGCTCCACCATGGTGACTAAGATCTTCTTCTTGTCCTTGAAANCTAAGAGACTCT GTATGAACTGTTCGCCAGTCTTTTACGGGAGTTCTGGTTAGGCCTCTATTTGAATCCTTT ACCCCATGGGAATTGGGG |
| GenBank Accession | BX942962 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:4030948 - go to primer design |
| BLAST e Value | 1e-68 |
| Hit Clone Code (BAC ID) | MBK21 |
| Hit Gene Code | At3g12690 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | AGC kinase 1.5 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g41040
| Sequence (A. th genome BLAST matches underlined) | >29-K015984-022-325-E04-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGTATCGTTAATAT AGCTGTAATATACATGGGTTCTGTTGACTCTGGTCATGCTGGTGCAGCCTGGCACTGTTG GCCTTCTCCTACAAATGCTGTAAGTTCTTGAATATGTCAGAGCTTCATGAGTGTATGCAA ATGGTCACTTGTTAAATTTGTCTTTGTGTTGTTGTTTTCAAGATTGCTGAGATCTGTCGT GTTCTAAGAAGCGGAGGTGTGTTTGTCGGGACAACGTTTCTCAGATACAGTCCTTCGACT CCTTGGATTATTCGTCCTTTCCAATCGGTAAAGAAAATTTATAATGATCAAAAGTGGCTA TTTCTATGCATAGATTTTGATCTTTATACATTTTGCATTTTTGCAGAGAATTCTGCAGAG CTACAATTACTTGATGCAGGATGAGATCAAGGATGTGTGCACATCATGTGGTCTCACAGA TTATGAAGATTATATTCAGGATTCTTTTATCATGTTTACTGCTCGCAAGCCCTAT |
| GenBank Accession | BX890983 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr2:17122588 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T3K9 |
| Hit Gene Code | At2g41040 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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