SimpleSearch - Line and FST details


Line specific information

 
Line ID 325E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N431161)
Segregation Analysis 50:45:44
Confirmed for Hit At2g34500
Parent of DUPLO pair none
Parent of pair(s) 9558, 93831, 93832

Gene hit At2g34500

 
Sequence (A. th genome BLAST matches underlined) 
>69-K015977-022-325-E09-8409
CGAACGAGTGCGACGGCGTTCCCGACGATTGGATGGACCAAAAGAGGCCCTTGGATGTTT
CGTTTCTTGACCAGGTAATATACTTGCTCGACGAGAAGGAAAACAAGAAATGCTGACACT
TAGTATGGTGCGAGATAGGCAAATCTAGAACCCGATCAAACCATGTTTCTTTGTTTCTAT
GGGATCCTCCCTATATTGAGAAATTTTTAGATTCTATGGGATCCTCCCTATAGTGAGACC
CCCCTTNCTTCCTCCCTCCCACCTCTCCCACATTTATTATTTCTATCCTCCCCCTTCCTT
TCCTTCCCCCCCCTAACCCCCCTCGTTTCACCCCCCCTCCCCCCTTCTGTCCCTCCCCCC
TTCCGTCTCTTGTCCCTCGTTCCTTTCTTCTCCCTCCGCCGCCCCTGTCACCCTTTTACA
TTTTGTTTTCTTCCCACCTCCCCCCCTTCCCGTTCTCCCCCGCATCTCTTTTTCCTCTCC
GTCACCCCCCTCTCTCCATCTCCCCACCTTTCTTTCTCACCGATCCACGCTCTGTCCGTC
CTCGTCCCACGCGCCCCCTCTACTTAGCCATCCCCGTTTCTTGCTCTCATCCCCCCTTTG
CACTCGCTGATTCGCAGTCACCCCCCTCCCACATTACCGGTTCGCTTCCGTAACTCGCGT
GCCTCTGTTTCCGTCGCCTCCTATCATCCCCCCCCATCTTGTTGTCCCATTTACACCCCT
TTTTAACC
GenBank Accession AL950058 [GenBank]
Graphic View Graphic view of gene At2g34500
Predicted Position of Insertion Chr2:14540978 - go to primer design
BLAST e Value 1e-34
Hit Clone Code (BAC ID) F13P17
Hit Gene Code At2g34500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 710, subfamily A, polypeptide 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g17320

 
Sequence (A. th genome BLAST matches underlined) 
>69-K015984-022-325-E09-8409
GCTACACTGTGGGATACCGGCCTATCATTGAGCACTTTCAATCTTTTATATTGTGACGGC
TCAGTCAAATAAGTTACTCGCTCTGTTTTTTCGGGCCCGAGAAGACTCTGGGCCTCGACC
CGTAACTTCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL950059 [GenBank]
Graphic View Graphic view of gene At3g17320
Predicted Position of Insertion Chr3:5916692 - go to primer design
BLAST e Value 3e-48
Hit Clone Code (BAC ID) MGD8
Hit Gene Code At3g17320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box and associated interaction domains-containing protein
Insertion Classification 5' region
Confirmation Status unknown


Last Updated on 10.06.2021 13:37