SimpleSearch - Line and FST details


Line specific information

 
Line ID 325F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N431165)
Segregation Analysis 50:43:42
Confirmed for Hit At1g63110
Parent of DUPLO pair 6796
Parent of pair(s) none

Gene hit At1g63110

 
Sequence (A. th genome BLAST matches underlined) 
>06-K015977-022-325-F01-8409
TGCTTCTCTCCGCTCACCAGAAGCACCTTCTCATTCGCAATCTCTACTCTGAAATCTTCT
CCTTCAAACTCGGGCATACCCACCAAAGAAGTGTAGGGGCTCGGGTACTTATAGCATAGG
GATTGCTGACATATGCTCTTGAGGGATTGCTGAGGGCTGACTATTCATGATCCTCCGGGA
ATTCCTTCTATGGGATCCTCGCCNTATAGTGAGGATAGAGTGAGACATGCATCTATGTCA
CCATATGCAGGTATATCTTAAGATTTGATCCTCTGCAAATTGGGATTCGTACGCTATTAC
AAGCTGAAGTTGTACATATTTGAGCACGATCTATGTATCATGGCTCACCATTGCTGCTCT
CGGATCTTGGACGTCTCAAGCCTCAAAGGTAGTGACTAATCGATTTTGATATTAAGATTT
GGGATTTATTGAGCTTGAATCATATGGAAACATGATTTTTTCCCACTCGGAGGGTATTGG
GAGACAATTTGTGCGTTTGCAGGATTAAA
GenBank Accession AL950063 [GenBank]
Graphic View Graphic view of gene At1g63110
Predicted Position of Insertion Chr1:23404862 - go to primer design
BLAST e Value 7e-98
Hit Clone Code (BAC ID) F16M19
Hit Gene Code At1g63110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GPI transamidase subunit PIG-U
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g26180

 
Sequence (A. th genome BLAST matches underlined) 
>06-K015984-022-325-F01-8409
TGTTGATGGGTTACCGTTGATAAGCTTCCTTCTCCCCAGTCTAAGAAACCAAAAACCACT
TCAGGCTCAAGTCGCTTGAGCTTATTATCTCTCTTTGTGTGTTCTGTTTTGATGAAAAAA
CCATAATGTTGCGTACTGCAATTTGTAATGTGATAAAAAGTTAAAGAGGTTCTGATTTTA
CCTTACGATGTTCCTTTCATGCCTTTGGTGCAAAATTTTGACGACAACATGAAGATCAAA
GGCATAAACCAAATTGAAAATTCTACAACCATTACGTGTATAACAGGAACCTATGGGATC
CTCCCTTTATAGTGAG
GenBank Accession AL950064 [GenBank]
Graphic View Graphic view of gene At5g26180
Predicted Position of Insertion Chr5:9152855 - go to primer design
BLAST e Value 1e-133
Hit Clone Code (BAC ID) T19G15
Hit Gene Code At5g26180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37