SimpleSearch - Line and FST details
Line specific information
| Line ID | 326G03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431275) |
| Segregation Analysis | 50:46:29 |
| Confirmed for Hit | At3g14950 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 585, 94752, 94754 |
Gene hit At1g75460
| Sequence (A. th genome BLAST matches underlined) | >23-K015985-022-326-G03-8409 TGTCCTGTATATTGGCGGGAAACCTAAGAGATAAGAGCGTTTATTAGAATAATCGGATAT TTAAAAGGGCGTGAAAAGGTTTATCCGTTCGTCCATTTGTATGTGCATGCCAACCACAGG GTTCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAATGACTTCTGTTCAACCACCCAAAC GTCGGAAAGCCTGACGACGGAGCAGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGC CTATGGGATCCTCCCCTATAGTGAGAGNGGANAANNACACGCAATTATTCGCTTGTATCT ACTGCGGAAAAGGATGTGTCCCCTTCATCATGATAGNGCGAATTCTACTTCTACTGAGAC ATTGAATTTCTGAACCACTACGCTCTCAATGCGGTAGGGATATTGAGCTTTGGAAGGAAT TGAATGTACCAGAATTATGAACACCTGCCTAGGTGTGAAAGAGAGATTGTCGTGGTAATA CGGGGATCTTGATGGAATTACGATATGCTTTCAAAGATAATATAGGATGTACAGCTGAAT CCATCACTAGAATGAGTGCGGGTTACTTGAGATAGCTTCCCAAGAGGAAACCTATGGGAT CCTCCCTATAGTGGAGGACNAAAAGAATGGGGACCTTCGACCGCCTGTTACGGAGAAGGG CAGGGCTCGATCCTAAACCCTGAAACGGTGGAAATTGCGGGAGCAAGCGACCGTAGCCTC CGGGTCAAAGGACGAAAGCCGTATTCGATCGACGCCGATTAGCGCCCTGAAGGCCCAAAG CTGGAACTCCTTTTGGACCCGGTTGCAAATCAGC |
| GenBank Accession | FR807969 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28328799 - go to primer design |
| BLAST e Value | 1e-10 |
| Hit Clone Code (BAC ID) | F1B16 |
| Hit Gene Code | At1g75460 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ATP-dependent protease La (LON) domain protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At3g14950
| Sequence (A. th genome BLAST matches underlined) | >23-K015978-022-326-G03-8409 TGTCCTGATATTGGCGGGTAACCTAAGAGAAAGAGCGTTTATTAGAATAATCGGATATTT AAAAGGGCGTGAAAAGGTTTATCCGTTCGTCCATTTGTATGTGCGTGCCAACCACAGGGT TCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAATGACTTCTGTTTGCAACCACCCGAAC GTCCGAAAGCCTGACGACGGAGCGGCATTCCAAAAAGATCCCTTGGCTCGTCTGGGTCGG CTATGGGATCCTCCCCATATAGGGAGAGTGGATAATGCAGGGATACATTTATATTCAGTG GAGGAACCATTAGATCCAACGGTGGCTGAAGATGCTTCAACAAGTAGATAAACACTTGAA CAAATGCACATATGCAAGAAGACGCGGTGAATGGAGTATTGTTTTGACTGAAGTAAGTGC AGCCATTGCGTCTGGAGCTGATTCTTCTCCTCAGGTAAAGAACAAAGATTCTTGTGTTGA TTTGTGTTACTTTATGAATAAATGAAGTGTTTTACATATATAAAAATTTTGTAGCTATG |
| GenBank Accession | AL950208 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:5031790 - go to primer design |
| BLAST e Value | 3e-146 |
| Hit Clone Code (BAC ID) | K15M2 |
| Hit Gene Code | At3g14950 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tetratricopetide-repeat thioredoxin-like 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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