SimpleSearch - Line and FST details


Line specific information

 
Line ID 327D05
Vector Used pAC161
Line Availability available as T3 set from NASC (N431337)
Segregation Analysis 60:58:50
Confirmed for Hit At5g65120
Parent of DUPLO pair 11699
Parent of pair(s) none

Gene hit At5g65120

 
Sequence (A. th genome BLAST matches underlined) 
>36-K015979-022-327-D05-8409
CCAAGAGGATGTGTTTAGTTGTTGACAACTTGGGCGAAGAAAGTGCTATGGCATCCTCCC
TATACTTAGATAAAGGTGGGGGGGAAAACCCAAAAGGGGCCTCCGCCCCGGGGGGAAAAA
CGGCAATACAATAAACTTTGGGGGGGGGGGTTTACCCGGAAAAAAGGGACCCCCCGGGGT
TTTTCCCCCCAAGTAAACCCTTTCCCCCCACACAAAAAAGGAAAAATCCCCGGGGGCCCC
CCACAAAAATCCCGGGTGGGGGGCCCCCCCCAAAGGGGGGGAANNANCAACAATAATGAT
CCCGAGGGTTTGTTAGTGCCTAATCCTCAGGCTATCAAATCGTTTAATATGAATAGATGT
TCGAATGTTGACGGTATGGGAATTGTTAATCACCATATGGAAGCTGACCGCGAGCTTAAA
TCTTGCTCTTGCTCCTTTTGCCTGACAGGCTTGGCTGATTCTTTAGTGTGTTGGCTTTTT
GATATCGCTGCCTCCTTGATTCTCACTAACATGATCTGACTTACTTTTGGGGATGTAATG
AATTCCTCCGCTGCATATATCTGGGCAGATCTTCCCTACCAGGAATCAAAAGTCGAATAT
TCGGCAAGCGTCCTTATTACACTGCCAAACCCCAAGTCCAATAACAA
GenBank Accession AL950289 [GenBank]
Graphic View Graphic view of gene At5g65120
Predicted Position of Insertion Chr5:26013358 - go to primer design
BLAST e Value 6e-120
Hit Clone Code (BAC ID) MQN23
Hit Gene Code At5g65120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNA-directed RNA polymerase subunit beta
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37