SimpleSearch - Line and FST details


Line specific information

 
Line ID 328G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N431467)
Segregation Analysis 100:86:73
Confirmed for Hit At4g31800
Parent of DUPLO pair 2643
Parent of pair(s) none

Gene hit At4g31800

 
Sequence (A. th genome BLAST matches underlined) 
>23-K016043-022-328-G03-8409
TGATCTGTAGATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGTTTGTATAGG
TAGACCTCCCATATGAAGAGACACCAAGTGTTCGACGAAAGAACTAACCTCGTCTTGCTC
CAACCATTTCCTCTTTAAGTGAGTAGAAGCCAAAACTGAGACCTCCTTCTTCTGAAATAC
GAAAATTTGAAATGAACCCATGATTAATTCCCAAAATCCCAGTTCATAGAAATTGAAGGG
ATACAAAAATCAACTTAGATTTCGGGAAAATGGATCAGACGAAATCCGGACTTACCGGAA
GTTTTGCGGAGAAAGGATTGGTGTTGAGATCGAGAGAGATGTCGAGAAACGAAGAACCGT
CCATAAAAGAAACCTTTATCTTAAGATACAAACCAAAGGACTATGGGATCCTCCCCTTAT
AGTGAGANANNNNNNNANNNNANNNNCTNGNNNNGCTCCACCNTGNGGACGANNATTTTC
TTCTCGCCTTTGAGATCGAAAAGACTCTGTATGAACTGTTCGCCAATCTTTACGGAGAGG
TCTGGTAGGGCCTCTATATGAATCTTTGACTCCATGGGAATGGGGGATCCTC
GenBank Accession BX285308 [GenBank]
Graphic View Graphic view of gene At4g31800
Predicted Position of Insertion Chr4:15383601 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F28M20
Hit Gene Code At4g31800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation WRKY DNA-binding protein 18
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR808005 [GenBank]


Last Updated on 10.06.2021 13:37