SimpleSearch - Line and FST details


Line specific information

 
Line ID 329B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N431506)
Segregation Analysis 50:38:26
Confirmed for Hit At5g35730
Parent of DUPLO pair 12448
Parent of pair(s) none

Gene hit At5g35730

 
Sequence (A. th genome BLAST matches underlined) 
>42-K016035-022-329-B06-8409
TATCATGANATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGGTAATCGACTTC
ACAGATTTATCTGGCATACAAAGAGGAAACTGAGGAAAGCAACAAACAGAACATTTGCAA
TTAACATTATACAGACACGAAGCTATGGGATCCTCCGCTATAGTGAGAGTCAATATTTTC
TGCTGACTAACATTATGGAAGTATAGCTTTTCCACTCGCTGTAAAGCGATAGACTCCTGG
CGATTAAAATTAAACTTGCAATTGGCGAATTTCTATGGGATCCTCCCTATAGTGAGANNN
NNNNNNNNNNNNNTTNCCNNTTTTTTTTNNTTTNNAAAATGTANATGTCCNNCCCNTTNT
TATAACNNNNNNCTNNNTNCCCNCNNTNNNTCNCCCNNNCCCCTCCCCCTTTCCCCCCCC
CCTCCTTTTTTTTTTCTTCNCCTCCCAATATCCCCCCTTTTAATAAAANNNAACCCAACC
CACAACAAAAAAAACAATTTCNCTAAAATANNNCCTTATTCACAACATCTTNTCCCAAAC
ACAATAAAAAAAAAAACAAAAAAAAAAAATATCCCCACCCCTAAAAATNCTACAAAATAA
CAAACTACATNTCCCTCCAACCCTCCCCCACCAATAAAACCCCCCCCATAAAACNTCAAC
CTACAAAACACCAACTCCCCACTTATTATTTTTCAACCTCTTATTCCACCACAATTACCC
CCAAACCCNACCACAAAACTTTTNCCNATATCTACATATAAATNTAAAAAAATNCAATTA
ACCCCCACCCCACNTAATTTACAAAACCCACACAACACCACACAACATTATTACAAAACT
AAANATAATTTTACACCACACACAAATCACCATAAACCTTAATTAAATTCAACATACACA
CCAATTAATATAA
GenBank Accession AL950507 [GenBank]
Graphic View Graphic view of gene At5g35730
Predicted Position of Insertion Chr5:13894967 - go to primer design
BLAST e Value 1e-40
Hit Clone Code (BAC ID) MXH1
Hit Gene Code At5g35730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation EXS (ERD1/XPR1/SYG1) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL950507 [GenBank]


Last Updated on 10.06.2021 13:37