SimpleSearch - Line and FST details


Line specific information

 
Line ID 330A11
Vector Used pAC161
Line Availability available as T3 set from NASC (N431595)
Segregation Analysis 50:49:32
Confirmed for Hit At5g58770
Parent of DUPLO pair 2696
Parent of pair(s) 90611, 90614

Gene hit At5g58770

 
Sequence (A. th genome BLAST matches underlined) 
>81-K016036-022-330-A11-8409
TGATCTGTNATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGAGAGCACGAATA
GCCTGAGAAACTTGCAGGGCCTTTGCTATGGGATCCTCCCTATGGTGAGACTAATCGTAG
CGGTTGGTTACAGTGGGAAATACGATGTTTTACAAGCGTGTAGAGGTATCGCGAGGAGAG
TGAAAGATGGCGAAATCGAAGTTGAGGAGATAGACGAGAGACTGATTGAGGAAGAATTGG
AGACGAATTGTACTGAGTTTCCTTACCCGGATTTACTTATAAGAACGAGTGGTGAGCTTA
GAGTGAGTAACTTCTTGTTGTGGCAATTGGCTTATACAGAGCTTTTCTTTGCTCAAGAAC
TTTGGCCTGATTTTGGGAGAAGCGGTTTTATCGAAGCTTTGATGTCGTTTCAGCAGAGAC
AACGACGCTTTGGTGGTCGTAAATCTTGATTTTCTTGNCAATGGTGTAATGAAAACTGAA
TATGATGTGTAATATACCTCAAGAACTATGCTTTTGAGATAGTACAGTTCCTTGTGTTGC
AAGATATTTGCTTTGAGTGATAAGTAACGACCAAGTAACCGCTGATTTTTATTAGCAAAT
TTTCAATTTACCGACATATAGCTACAACAGCATAATGATCTCTGACTGCGAAACCAGTAG
TTTGATCGACATCTCAGATGAACCTGACCGAACAGGAGGGGAGCAGAGGATCTAACCCGA
CGGTCGAATCGTCTTTCGCGGCGCTGATACCGAACATGCCTCTTGGGGATCTCCCCCCAA
TGGGGGGAANNNNNNNANNTGTGTTGTTCTTGTTGTTGTG
GenBank Accession AL950635 [GenBank]
Graphic View Graphic view of gene At5g58770
Predicted Position of Insertion Chr5:23735105 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MZN1
Hit Gene Code At5g58770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Undecaprenyl pyrophosphate synthetase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL950635 [GenBank]


Last Updated on 10.06.2021 13:37