SimpleSearch - Line and FST details
Line specific information
| Line ID | 331B09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431701) |
| Segregation Analysis | 50:36:34 |
| Confirmed for Hit | At3g17510 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 89945, 89962, 90000, 90047, 90048, 90049, 90050, 90051, 90052, 90053, 90054, 90062 |
Gene hit At4g39080
| Sequence (A. th genome BLAST matches underlined) | >66-K016037-022-331-B09-8409 TGATCTGTACATTTCCCGGACATGAAGCCATTTACATTGAATATATTCTGTCAGCAGATA TAGAATCTTCTTGTTATCGAGATTCTCCTTTTGTTCTGCTATGGGATCCTCCCTATACGT AGAGACAAAGGATGAGAGGAATGAATCACATCACTCGTCTTCATTTGCCGTGAAAATGAA AGTGAAATGAGCGAACTTGTAACCATCTCCTTCGTAGAATTTGTTCTGAAACTCAACCCA GTGAAGACGCAGCGCGTGAAGGAACGCGCTTAGTGTCTCCATCACCAGCAAAACTCCCAC GGTTGCGAATATGAACACCAAGACCCCAACGATCAGGATCAACGGATTGTTGTAACTGTT TCGTTGATAGTGCCAACGAGACACGAAAAGATTATACATGTTAGACCAAAGATGGAGATA GATTTAGGGGGAAAAAAGAGAGAGAGAGAGATGGATCAATGAATGCATACCCCCAAGCGA GAAGGATGACCTTCTCATAGAAGACTGATGACAGCTCCGAGTGGGCAAGACTGAAACAAA AGAATGTATATCAAGCCACGAGTATAGGTTATGAAATTCATGTATAGCTTCTACTACTCA TACCTGAGAGCCCATAGACGCATGAAAGAAGCGGTGGTGGGAAACAGCTCCAGGCACAAA CTCTATGGTGGGGATCAGCTGATGCACAAATATCTCGCTGATTTCAAACTCCCTCTGCCC ATGGGATCCCCCTCC |
| GenBank Accession | AL950765 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:18214844 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F19H22 |
| Hit Gene Code | At4g39080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | vacuolar proton ATPase A3 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
Gene hit At3g17510
| Sequence (A. th genome BLAST matches underlined) | >66-K016046-022-331-B09-8409 TATCCTGTAAATTTCCCGGACATGAAGCCTTTACATTGAATATATCCTGTAGACTATTTA GTAAACCATATATCCACGTTCAGTGACTATTTAGTGAATATATCCTGTAGACTATTTAGT AAACCATATATCCACGTTCAGTGAACAGTGAAATAATGTTTACGTAATAGTTAATATACC TCAGCTGTTACTGATAAACCAACTTGACCTTTCTGGTTTCTTTCTTCTTGTTTTACTCTT AACTGAAACAAAATACAGTTTAAAGTTTATAAACCTACAGATTTGAAATTCCAAGTTGCT AAGGAAGAGGAAGACCATGTTGTGAAGACCCACCTTGGCATGTTTCTTTTGTACACTGAA TCCCATTTCTGTAACGGCTGTTTCGATTTTCTCCAGTAAATCTTTTGCTGAGCTATTTGA AGTGAATCTTATTCTCCTCTCTGATACATTCTGAGAAAGTAAAAGTATAACTCCTTTTTA TTATACATTGGCTCAAGCAGAGAGCAGATCTTTGAAACAGAGTATTAGAAGATTAGTTAC CTCTTGTTCAAAGAAACCGGACAGGTCAAGAAAGGAAGACATTCCGATTAACTGAAACGC ATTGATGATGGTCGGTGAATCACTGCCCTTCCCTTCTTCTGATCCCTAT |
| GenBank Accession | AL950766 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:5989506 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MKP6 |
| Hit Gene Code | At3g17510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | CBL-interacting protein kinase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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