SimpleSearch - Line and FST details
Line specific information
| Line ID | 331E02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N431730) |
| Segregation Analysis | 50:48:35 |
| Confirmed for Hit | At1g53270 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 88882, 88883 |
Gene hit At1g53270
| Sequence (A. th genome BLAST matches underlined) | >13-K016037-022-331-E02-8409 TATCATGAGATTNCCCCGACATGAGCATTTACAATTGATATATCCTGTAACATGTTCTAT GGGATCCTCCCTATAGTGAGACTTCACCTTTGCAGCCGCGTCTTTCCTCTTTGTCTTCAG CCTCAAGAGTGCGCTGTACGTCAGTGTTTCTTGCACCGTAAAAAACGGAAACAGAGCATC TTCTTGTGGCACAAACCCTGAAACCCTCCTGTACTCAGGACCATCCATAGGCCTACCGTT GACAAGCACTTGCCCTGAAACTTTCCCATGAGAAACTTTTCCGGCTATGGGATCCTCCCC TATAGTGAGAGCCTCANGAGGGTCAGGAGTCCCTTGCTTCAATTTCAGCTCCTCTGTAGC ACGTGCTATGGGATCCTCCCTATACCCAGACAACAAACCTACAACCGCAAAAAAAAAAAA TAAAAATAACGCAGGTCGCTCATGACCGCCGCCAGATAAAGCGAAATAATGTAAATCCAC AAAACCAAACGCATCTCGGGACAAAATGGTAATCCCAACAAAAATAGACGCCAAACTACA AAAAATACAAACACGCAAACTCAGAAGCACCCAATCCATAACACCCCATAAACAAACCTA TACCCTACCGCGTCCACAACAAAAGAACATACAAAGATAAAAAAACAAACCCGGGAAAAA ATAAAAAAATACAAGGAACAAACAACAGAAA |
| GenBank Accession | AL950802 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:19863324 - go to primer design |
| BLAST e Value | 2e-110 |
| Hit Clone Code (BAC ID) | F12M16 |
| Hit Gene Code | At1g53270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ABC-2 type transporter family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g15330
| Sequence (A. th genome BLAST matches underlined) | >13-K016046-022-331-E02-8409 ATGTCCTATAGCATGCCTCCGTATAGTGAGACTGAAGGAAAAAGAATCTCAAGATTGTTC TCTTATTCACGGACTAACCTGTGGGATCCTCCATATAGTGAGAGCCTCTCTGGTTTTTGA CTTGCCCCTCTCCTTTTCTAACCCCTCCTGACATCCTTCATGTTCTCATGACCCTCCCTT AGGCTACTTTTTACCAGCTCTTTTTCTGACAATTTCTTTTGTGTACATTACCCCACCACG TAACCCTTTGTCTTGCGCGTTTGGCTTATTCCCTTCTCACCGGCTCTTTTCTTTGCCCCA CTACCGCATCTCCCTTTTCTGACTCCACACACCACTAGAATGCTGCTTTTCCTACGAATG AACCCGCCTCTGCCCATCTTCGATATTGCTTCTTACATCTATTACCCCCCCGCCCCTACC CCCCCCTCCCCGTTCCCATGTTTACGACCCTTTCCTTGTCCCACCAATTTTTCCAATAAT TTTTTCCCCCCCCATCCTATATATACCCAACCCTGGCCAACCTAATGTCATATTGCCCCC CCTCCTCCCCTATCTCTCCATGGACAGCAAAAACGCACCGGAAGGACGGATCCTCTGGCA TGATCCCCATAATTGTTTCGCCCCAAATTCGCCTTCACACCCTATAATACTTTTTCTATT CTCCCCTACACAATATCTTTTTCCCCATA |
| GenBank Accession | FR808060 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:4981766 - go to primer design |
| BLAST e Value | 4e-07 |
| Hit Clone Code (BAC ID) | F8M21 |
| Hit Gene Code | At5g15330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SPX domain-containing protein 4 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
