SimpleSearch - Line and FST details


Line specific information

 
Line ID 332A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N431784)
Segregation Analysis 50:50:39
Confirmed for Hit At3g48960
Parent of DUPLO pair none
Parent of pair(s) 3098, 10810

Gene hit At3g48960

 
Sequence (A. th genome BLAST matches underlined) 
>57-K016064-022-332-A08-8409
TATCATGAGATTTCCCGGACATGAAGCCATTTACTCAATGGAATGGATTTGGATATGATC
TCTTTGTTGTTATGCTTTATGTTTGTGTTTAGGTTGGAGATTCTGCACAACAAGAGTTGG
CCAATGCAACACAAGTCCAAGTAGATCACATGCCTATCGTTCGTGAAATGCCAACAATGG
AGCTTGTGAAGCTGACATCTGACATGAAATTGTTCAATGCTTATGACAAGATCCGCCTAT
GGGATCCTCGCCTATAGTGAGAAATATCCCCCCTATGGTCTGCTGCGACTATTGAGTCAT
CCCTACAATGAGGAGNAGGANNNNNNGNGGNNNAGGGNNNCCCCGGGGGGTAAAGGGCAT
AGTAAGAGATAACATATGGGTTAGCGAGGCACCACCGCCCTGGTAAACAACACCCCACGA
ACGCCAATAGCAATTGCGTGTTAAAGGCGCGGACCGCGCTCAGAAGATCCACAACCCCGC
CTGCCGCATGACTAAATAAAGTTCGAGCGCTATCCTAGTTCTCCCCACAGGCCACCACGT
ATACGTTGCGTGGAGGCTTTTTGTGAATCCAAGCGACATCCGTACACCACCCTCCTGCTG
TAACCCCCCCCGCCCCTTATTCGCATAGTTTAATAAAAATACACTAGAACAGGGGGCGCG
GCAATCGAAGACAGGAAAAACAAAAACGGCGCGTCGACCGCGGAAATAAGACCAATAGAA
AAAAGCGGGGCATGCAACGCCAGCAGAAAAACGCCCCATACAAACACACGACCTATTTAA
CAACACCCATAACAACCCGCGAATAATACCCACACAGCAACACAATCTACATAACAAT
GenBank Accession AL950883 [GenBank]
Graphic View Graphic view of gene At3g48960
Predicted Position of Insertion Chr3:18150720 - go to primer design
BLAST e Value 2e-101
Hit Clone Code (BAC ID) T2J13
Hit Gene Code At3g48960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L13e family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37