SimpleSearch - Line and FST details


Line specific information

 
Line ID 332C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N431803)
Segregation Analysis 50:46:38
Confirmed for Hit At5g42420
Parent of DUPLO pair none
Parent of pair(s) 4331, 4345, 4351, 4354, 4369

Gene hit At5g42420

 
Sequence (A. th genome BLAST matches underlined) 
>19-K016059-022-332-C03-8409
TATCCTGAAATTTCCCGGACTGAAGCATTTACATTGAATATATCCTGTGATTGACTATCA
TATTGTTGGTATTTGTACTGTGACTGATGTTAAAGTTAATGCCAAAGGTTTTATCTGTGC
TTGTGTTGCGATTTTCTCGTCATCCTTGCAGCAAATTGTAAGTCTTTTTGTTTGGTGATT
TGGTTTTGAAGCTTGTGGAATTCAAATCTGATCAATTGGTGTTTTTTCCTTCTGTGTTGC
TTAGTTAATAGGTTCTCTACAGAAGAAATATTCAATTGGGTCCTTTGAGTTGTTGAGTAA
AACAGCGCCGATTCAAGCTTTTTCGCTTCTTGTTGTCGGTCCTTTAGTTGATTATCTTCT
TAGTGGGAAGTTCATTATGAAGTATAATATGTCTTCCGGTTGCTTTGTAAGTATCTCTCT
TCATGGCTCTGCTATGGGATCTCCCTAATAGTGAGAGNNCTTTNNNCTTCTGAAACTGTA
TCTTTGATATTTTTGGAGTAAACTAGCGTGTCGTGCTCCACCATGGTTGACGAAAATTTT
CTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAATCTTTACGGCGAG
TTCTGTTAGGTCCTCTATTTGAATCTTTGACTCCATGGGAATTTGGGATCCTCTA
GenBank Accession AL950907 [GenBank]
Graphic View Graphic view of gene At5g42420
Predicted Position of Insertion Chr5:16969442 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MDH9
Hit Gene Code At5g42420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nucleotide-sugar transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL950907 [GenBank]


Last Updated on 10.06.2021 13:37