SimpleSearch - Line and FST details


Line specific information

 
Line ID 337A01
Vector Used pAC161
Line Availability available as T3 set from NASC (N432257)
Segregation Analysis 50:45:37
Confirmed for Hit At5g12150
Parent of DUPLO pair none
Parent of pair(s) 12466

Gene hit At5g12150

 
Sequence (A. th genome BLAST matches underlined) 
>01-K016136-022-337-A01-8409
CATGTAGATTCACGGACTGAAGCCTTTACAATTGAATATATCCTGAAATGAAAGACAATC
TATCCTCTATTTTTTTTGGGGTATAATTTTGAGGGGAAATAAACTTCCATTTTGCCGACC
AAGCTTGCCATGAAATTGTCAGCGCGGGCAGATTACACGAGCCAATGCAAGATGAGACAG
ACCCAAGACCAAATCTAAGAAGCTAAAATAAAAATTACAAGAGCCCAATCCCCCCTCAAA
ACCTATACATAACACAGGTACCATAAAATCTCAGCACAGACAGACCAACAACTCAAAAAT
CCGACCTCATTATTTACCGTCCGCGCTAATACCAAAACTAGCCAAAAGTAACCACCGGAA
CCGAACAAAAATAAATGAAGCCCAAACGCACACATACACGCAATACATACCCCATTTCAA
ACACCGCCTCTCATCGATAGCCACCCCAATTCCTCCACCTAAATACGCTCAAAATCCCTT
TTCCCCACCTTTACGCACCATCGACCACACAACTCACCCCCCCCACCCCTGCTCTCCCAT
CCTATATCTTACGAACTTCCATCAAACCCCAACTACCATACACCTATCACACACAAACTC
ACACGAATTTATTATATCCCACCACCTTAATCAATAAATCCTATCGCATTACCCCTTACA
CACTCTCACAACTCGCTTACCCATCCATCGTGCGTCTAGCCTTCTCGTCCTCTCCTTTCC
GAAAACACATGCTTACCTAGCCCGTACGTAATATACGCCCCTAAAGCGCTTCGACGCCCA
CATCACATACCGACCAACACCCTCTACGCACACCCGCCCACCATATTTTCTCATCACCAC
CACCA
GenBank Accession AL951540 [GenBank]
Graphic View Graphic view of gene At5g12150
Predicted Position of Insertion Chr5:3925564 - go to primer design
BLAST e Value 4e-29
Hit Clone Code (BAC ID) MXC9
Hit Gene Code At5g12150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Rho GTPase activation protein (RhoGAP) with PH domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL951540 [GenBank]


Last Updated on 10.06.2021 13:37