SimpleSearch - Line and FST details
Line specific information
Line ID | 337E01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N432305) |
Segregation Analysis | 50:47:43 |
Confirmed for Hit | At3g25730 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F6N7
Sequence (A. th genome BLAST matches underlined) | >05-K016136-022-337-E01-8409 TGATCCTGAAATTTCCCGGACTGAAGCCATTTACATTCAACTTCGGAATTAAAGACACAT ATCAATGAATATTCCTGATGAGGTTATCGAAAACGTACTTACGCCGCTATGGGAGGATAT CATGGTATGGAAGTTTCAAGACACGGCACTCCATGTGGCTAAGGTTGACTGTTATTGCCA ACACTCAACCAAAATATGGGGTTTGATACGCAAAAGATTGATGTCTACGGAGTTAATTCC ACAACTCTGAAATTCGGAAAACTGGAACTTAAATTATGAAGACCTCTTCATATATTGGCT TTCCACTATGGGATCCTCCCCTTATAGTGAG |
GenBank Accession | AL951615 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:21371974 - go to primer design |
BLAST e Value | 7e-129 |
Hit Clone Code (BAC ID) | F6N7 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At3g25730
Sequence (A. th genome BLAST matches underlined) | >05-K016158-022-337-E01-8409 TGATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGTTATTTACACATAAATACATCT CTCCAAGATTATCGCTGAAGAGAGATTCAATCAAAAAGTTTTTTTTTCTTTCCCAGGTTG TTAGATTGGGATTACAAAACTACGTTGCTTCTTACGCCTTAACGACGACATTAACACCTC CGTTGTTTCCTTCATCATAGCAACGACGGCGCTTTAAAGAAATATCAACCCCAAACAATC TCATAACCCGCATCCCGTCTCTATGGGATGCCTCCCTTATAGAGAGAGACCTCTTCATAT ATTGGCTTTCCGCTATGGGATCCTCCCTATAGTGAGATC |
GenBank Accession | BX285315 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:9397579 - go to primer design |
BLAST e Value | 1e-40 |
Hit Clone Code (BAC ID) | K13N2 |
Hit Gene Code | At3g25730 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | ethylene response DNA binding factor 3 |
Insertion Classification | TS2TE (3') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |