SimpleSearch - Line and FST details
Line specific information
| Line ID | 337G08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N432336) |
| Segregation Analysis | 50:42:40 |
| Confirmed for Hit | At4g06540 At1g43620 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g06540
| Sequence (A. th genome BLAST matches underlined) | >02-K115713-0022-337-G08C-8409 AGTGTATCCACCAAACAGAATCAGTCTAAGCCATTTGTTCAGTACAACCAAGGTTATATC CCTAAACAACAATTTAATGGATGCTAGAACCAGCAGAATCCACCACCAGGGTTCACTCAA CAACCACAACAATCCCCAACAGCTCAAGATCCTGAAATTAAGCAACTCATTCAACAAATC ATTCAAGGACAAGCTACTGGAGCTATGGCTTTTGACAAGAAGATAGCTGAATTACACAAT AAGATTGATTGTTGTTACAACGATCTAACTGTCAAGTTTGAAGCTCTGAATTCCAAAATC AAGTATGTGGAGAGTCTACTCCGAAGCATCCTCAGCAACTTCCAGGAAAAGCAGTTCAAA ATCCTAAGGACTATGCTACTACAAATACTATCACCATCCACCAAGAAGATGAGTCTCCAC CAAGTCATCAGACTCCCAATACTGAGGACAGTATGATTCAAGAAGGGGGGGGGGATTCAA CTCAAATTGCTGCACGACCACCCTGCAATTCATCAGGATTATAGAGCACACACCTTTGCT GAATACTCACCACTCTGAAAAAGATTTCAAAAGAGAAAAACTCAGGAAGGATCAGTATCA AGAGTTGATTAGTAGAGTCATCACTCAAGAAACTTACAAGAAAAAAGTCACTTAAGAAAA GCTTGATGATCCCGGTTCATTCACTCTTCCATGCTCTCTAGGACCATGGACATTCGATAG GTGCCTTTTGTGATTTGGGAGCATCTGTTAGCCTTATGCCTCTCTCTACAGCTAAAAGGC TAGGAATCATGGAATACAAGTTCTACAACTTAGTTTTACTCTTAGCTGACGGTTCTGTTG CACATCCCCATGATCTAATAGAAAATTTGCCTGTTAAAATGGGAAAT |
| GenBank Accession | HG967723 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:3376288 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F19O5 |
| Hit Gene Code | At4g06540 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g43620
| Sequence (A. th genome BLAST matches underlined) | >63-K016158-022-337-G08-8409 ACAAGATCAGTGTATCCACACAACAGAATCAGTCTAAGCCATTTGTTCAGTACAACCAAG GTTATATCCCTAAACAAAATTTAATGGATGCTATGGGCATCTCCCTATAGTGAGAGGNNN CATATGGNCAATAAAACTGTTAAAGATTCCAACACAGGACGCTTCGGTGATGAGTATGAA AGAAAGCAACTTAGATGTTATACCCCAGCTTTTAGTCCAGTCGCTGTGGATCCAGCACCG CCATGATGAACCTTTATATCCACAACACAAGAAACAGCCTCAATTAGAAGATAACTCTTC GGAGATGTGAATGTAGTAATATATTGAAAATCTAAAGAGGGCTTACCACAGCTGAACATT GAGGAAACAACCAATCGTGAGGACAGTCCTCCACTAAGAATACATTTTCAGGAACTTCAG TAGCAACTGCAAAATGTTAGTTGGTAAAAGTGTGTCAGGAATCAGTATAAAAGCAAGAAG AAAACCATTTCAGTACACAGACTCACAATAGAAGGTACAGAAGCTGCTTACGGTTTCCAA GGCCAACCCAACCTCGATCAACTATCCCTCTCTGTTCTGTATCTTTCAATGTTTCCAGTA TAATGTCCATTGGTTTGTTTTGGATCATCCAGAGGGTGGCAGTGGAAAGGAAAAGCCACT AGAAAGCAACTATACTGTGAGCTGAGGCTA |
| GenBank Accession | AL951665 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:16426117 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T10P12 |
| Hit Gene Code | At1g43620 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-Glycosyltransferase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |