SimpleSearch - Line and FST details


Line specific information

 
Line ID 338C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N432379)
Segregation Analysis 100:93:87
Confirmed for Hit At5g01820
Parent of DUPLO pair none
Parent of pair(s) 89894, 89916, 89938, 89955, 89994, 90010, 90043, 90074, 90119, 90129, 90146, 90162, 90166

Gene hit At5g01820

 
Sequence (A. th genome BLAST matches underlined) 
>19-K016137-022-338-C03-8409
GACCTGCTAATTTTGATTTGACGCAATTATAGTACTACTTAATTATCTCAACTTATAATA
TATGATTTACCTTCTGCAATAGGAATGCCGGTACTATGGGATCCTCCCTATAGAGATGAA
GCGGCTCTTTGTCTCTTCCTCACCTCTATCATAACCAGCTCGTCCGTTAGCTGGTTTATC
TCAACCACCATTGCGAAGTTACCTTTTTGCCCCTCGATCTTCATCCCCCATGTTTCCTTC
TTCGCCACCGTCAGATTCTCCGCCGACACGATCTCCTCCAGCCTCTCCACCACCCTCTCC
GCCGTCCACGCCGACACGAACCGTTCCACTCGGTCGTACTTTCTGGCGTCTCCGAAAAGA
CCGGAGAGATTGAACCCTGGAGATCCTGAGATGATGTCGAATGCGTTCATCCTCCTTGCT
CCCATCTCGCTGTCGGTCTCGTCCGCCGGGAGTTTCATATCGGAGTCCCCTATGGGATCC
CCCCNATATGGGGAGACGAANCAGCTCTTCTCTCGTCTTCTTCTTATAGAGAACTGTCAT
TACGACCATAGCTCCAATGATAAANAAAATATGTAGATCTCGTCAGTGAGAGATACATAC
GTACGTTGTGACTTTGACAAAAGACCAATCCAGTGAACTTATGACAAAGATCTCTTCGTC
GenBank Accession AL951727 [GenBank]
Graphic View Graphic view of gene At5g01820
Predicted Position of Insertion Chr5:313447 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T20L15
Hit Gene Code At5g01820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine/threonine protein kinase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL951727 [GenBank]


Last Updated on 10.06.2021 13:37