SimpleSearch - Line and FST details
Line specific information
Line ID | 338F04 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N432416) |
Segregation Analysis | 64:58:42 |
Confirmed for Hit | At5g47640 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g47640
Sequence (A. th genome BLAST matches underlined) | >30-K016137-022-338-F04-8409 ATGAGCATTTTACATTGATATATCCTGTATATGCATGTCGACCCTATGGGATCCTCCCTA TAGTGAGANNGACAAATACTCNATTCTGTTGCTATTCCAGCAGCTGGCTTTGTTGGACTC GTAGACTTATAAGGTTCCGTCAAACACTTCTACCCTATGGTCTTTAACACTGTCGTCACG GGTTGTTTTACTTTTCCTCGTTGTCCCATACATGATTGGTGATGAGCTGCGGCAGTTCGT TGCACTGATGCTGCTGCTTTCTCAGACTGCTACCGCCTCCAAGAATGCTGCGTTCCTCGC CTACGTGAGCAACCATATAGAGAGTCTATGCTCTGGCGATTTCCTCACTCACCCTATAGG ATCACCGTCTAGTGAGAGATTATTAGGTATCGTAAGGTGTAGATAGGTGGAGAAAGCGTC GGGTACTCCCGCGGTGGCCTGTACATTGACAAACTCCAAGGGGATCCCTCCTTGTCTGCT ATAGAGCATGACCCGTTCTTGCCGATCGCTCACTTAAGCCTGTTCGTGAATACGGTCTTG CCCGCCAACGCCAAGATCTCTAAAGATGCCTAAGAGACGATGCAGGAGTGTGTCTCCGAG TTCATCAGCTTCGTCACCGGAGAAGCATCTGATAAGTGTTCGAAAGAGAAGACGAAGACG ATCAACGGAGACGATTTGCTCTGGGCTATGACTAC |
GenBank Accession | FR808182 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:19309047 - go to primer design |
BLAST e Value | 9e-79 |
Hit Clone Code (BAC ID) | MNJ7 |
Hit Gene Code | At5g47640 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | nuclear factor Y, subunit B2 |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | FR808182 [GenBank] |
Last Updated on 10.06.2021 13:37 |