SimpleSearch - Line and FST details


Line specific information

 
Line ID 339B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N432469)
Segregation Analysis 50:31:24
Confirmed for Hit At5g52070
Parent of DUPLO pair none
Parent of pair(s) 11083

Gene hit At5g52070

 
Sequence (A. th genome BLAST matches underlined) 
>66-K016138-022-339-B09-8409
TGTCATGTAGATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGTAAAATGATG
ACAACGTTAAAGATGAATTCTATAATGAGCTACAGGTGAACATCATCAGAGTTACGAGGA
GATATTGGTGAATCTGATGACAATGCTACGAGTGCTATTAAGGAAGAGGAGTTGAGGATC
TAAGTTAGAACTATGGGATCCTCCCTATAGTGAGACTGANNGCTCANNNNCCCCCGGAAG
GCCGTCTTCATCTCCGTCCATCGGAGCTGCGCACGAAACTCCCAACCCCATTCACAGGCA
ACAATGACCCTTCACACCGTCTCTCTGCCCAGGTGCTCGTAATCCGCACCGTCACAGACC
TGTCTCTTTCACCGACCCTATCGCTGAGACTATGCCCGGATAGTTACGCCTTCCGTGCGG
GCCCGAACTTACCCGACTACGCAATTTTCCTCCCTCAGGACCAGCCTAGCTCCCCCTCGC
CGACCCCGCGGGCCTGCCGTCCCCTGCTCCCCTGCTCTCAAGAAACCGACTTTCTCTACC
TTCCTCAACCCGCGCAGGCTTCAGTTCATCCCCCGACCCCTCCGCCCTTCTCGAAAACCG
CTGTTCCTGCATAACCACCCCCCGCCCCTTCCCAATTCCACCACC
GenBank Accession AL951863 [GenBank]
Graphic View Graphic view of gene At5g52070
Predicted Position of Insertion Chr5:21163491 - go to primer design
BLAST e Value 9e-73
Hit Clone Code (BAC ID) MSG15
Hit Gene Code At5g52070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Agenet domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37