SimpleSearch - Line and FST details


Line specific information

 
Line ID 339F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N432517)
Segregation Analysis 50:49:47
Confirmed for Hit At3g09780
Parent of DUPLO pair 2356
Parent of pair(s) none

Gene hit At3g09780

 
Sequence (A. th genome BLAST matches underlined) 
>70-K016138-022-339-F09-8409
ATGGCGCAGAAGAGAGATAGCCGTCTAACGACGCCGCAATCGGACCGGAGGATCAAATCC
GGATCCGGGTTTGGGCAAATACTCGAGAATGAGAGAGAGAAAGAGGAGAGAGCAACGGGT
TTCCATTGGAGGTGAAGTTCATGAACTGTGAAAGAATATATTGACACAAGCTGCCATTTG
ACAGTGTGATGGCTAACCAACAGACAACGTGGACGGCGTCCTCATTGGAGATGATAGCCA
CCAGTTCTACATATTTTATTGAACAACTAATTTACTGTATCTATTCATATTCATGCATGT
AAATAATTTACGTATATATAATCCCTGGGGTTTTGGGGGTAAAAAAAGGTATATACTATA
GTTGATAAATCTAAAAGAAAATTATTTCCATAAAGGGAAAATCTAATGAAATTTGCCTTA
CTGGGAGACAATAAGATCTTGTCCCAGTGATTTCCTGTCAGATGTTTGGAGCTTTAGAAC
AAAAGAAAAACTTTTTTGTTTGGTTGCTGTGGAACTCACCGTCATTGTCACCTTGTCAAC
GTATATGAAATGGATAATATAGTAGGTAACAAAATAGAAGTAAGATAGGAGTCAATAATT
CCATATTTTTCATGAAATTTTAAATTATCGAGGAAATGATGTGTGGGGTTATAAGTTCGG
CGTTTTTGGTGCATATAATCCAAAAAACATGCATCGGTGCTATAAACGCAATGTTAGATC
CTTTTTCTAATCTAAAAATGTTTACTTCAATATTTGCTTCTTAATGTGTTTGGGTGATAC
TATAAACTTTATCCAGAGTT
GenBank Accession AL951928 [GenBank]
Graphic View Graphic view of gene At3g09780
Predicted Position of Insertion Chr3:3003065 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F11F8
Hit Gene Code At3g09780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CRINKLY4 related 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL951928 [GenBank]


Last Updated on 10.06.2021 13:37