SimpleSearch - Line and FST details


Line specific information

 
Line ID 340D10
Vector Used pAC161
Line Availability available as T3 set from NASC (N432590)
Segregation Analysis 50:43:38
Confirmed for Hit At5g05960
Parent of DUPLO pair none
Parent of pair(s) 3194, 6901

Gene hit At5g05960

 
Sequence (A. th genome BLAST matches underlined) 
>76-K016161-022-340-D10-8409
TATCCTGAAATTTCCCGGACATGAAGCCATTTACTTTACATGCAAAATTGCAGCTGCAAT
GAAATAGAAAAAGTAATAAGCTTTTTATGTCATTACCTCCACATTTGTAACCGACGGGAC
GATTAGCGATGTTGCAGCGTTTAGGAATAGTCATCGAGATCTCTGGCTTTGCTCCGGAGC
TCCTATGGGATCTCCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNNNNCNNNTTTTTTT
NNTTTTNNNATTTTNTNGGTTTTTTTTATATNNTNNAANTNNTTTTNTTNTTTNTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTNTTTTTTNTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTT
TTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTNTTTTTTT
TTNTTTTTTTTTATTTTNNTTTTTTNTTTTATTTTTTTTTTTTTATTTNNATTTAAATAT
ATATATTTATNATATTTATTATAAATTAATTTATTTTTTTTATATTATTTTANTTTATTA
TTNTTTTTTTTTATATTATAACATTTTTTTTTTATTTTTTTTTAAATATTACATTTTTTT
TATTTATAATTTTATTATTTATTATTTAATTTNATNTTTATATATTTTATAAATAATTTT
TTTTATCAATATANTATTTCTTTNCTTTCCCTGTTCTAAATATCTCTTTAAAATTT
GenBank Accession AL952025 [GenBank]
Graphic View Graphic view of gene At5g05960
Predicted Position of Insertion Chr5:1790645 - go to primer design
BLAST e Value 1e-71
Hit Clone Code (BAC ID) K18J17
Hit Gene Code At5g05960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37