SimpleSearch - Line and FST details


Line specific information

 
Line ID 340H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N432632)
Segregation Analysis 50:50:49
Confirmed for Hit At3g14570
Parent of DUPLO pair none
Parent of pair(s) 5466, 5477, 5483, 5523, 5645, 92365, 92372

Gene hit At3g14570

 
Sequence (A. th genome BLAST matches underlined) 
>32-K016152-022-340-H04-8409
TACAGCAAGATGCACTTTGGCTTCCAGGAACTTGACAGGAACTTGCTATCGGTATTGTAA
AGACTGTAATTACACATGGTGACCAGACTTTCAATTTTTTTTGCTGCTATGGGAT
GenBank Accession AL952092 [GenBank]
Graphic View Graphic view of gene At3g14570
Predicted Position of Insertion Chr3:4893676 - go to primer design
BLAST e Value 2e-30
Hit Clone Code (BAC ID) MIE1
Hit Gene Code At3g14570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucan synthase-like 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T5K18

 
Sequence (A. th genome BLAST matches underlined) 
>32-K016161-022-340-H04-8409
TGTCATGAGAACTGCGTACAAAACACAGGCAATTCTGCCTGCGTGTGATCAGCTTCTCCA
GGTGACAGACCAGATAAAAATTCCTCAGGATAATGTTATCTCTTTGAAATTGAACTTCAA
CTAAGGGATCCTCCATATAAAGAGAACTTAATGCTGATACGCTCAAGGTAACAAGGAATA
TTCTACGTCAGAAGAAATAACAAAGATATCACTTTGGAATCCTCCCTATACAAGAGCTGA
AGAAAATTACTCCTATTGCTTATTCTCAACACTCAAGAATTAATCACACTCTTTTTCTTT
TTCATCTTCTATAGCTAAACCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL952093 [GenBank]
Graphic View Graphic view of sequence AL952093 of line 340H04
Predicted Position of Insertion Chr4:10586934 - go to primer design
BLAST e Value 4e-44
Hit Clone Code (BAC ID) T5K18
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37