SimpleSearch - Line and FST details
Line specific information
| Line ID | 341D06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N432682) |
| Segregation Analysis | 38:9:7 |
| Confirmed for Hit | At2g44160 |
| Parent of DUPLO pair | 12588 |
| Parent of pair(s) | none |
| Note |
Gene hit At2g44160
| Sequence (A. th genome BLAST matches underlined) | >44-K016153-022-341-D06-8409 TATCCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATACTTCGGCGTGGTAAATCGT ATAAGAAAAGAGTGTTCATTAGAAAACCCGGATATTTAGAGGGGCTGTGAAAAAGTTTAT CCGTTCTCACATGTGTATGTGCGTGCCAAACAGCGAGGACAACCCCTCGGGAGTGCTCGT CATTCCGTGATATAATGACTTCTGGTCGACCACCCAAACGGCATAAAGCCTGACTACTGA TCAGCATTGCATAAAGATCCCTTGGCTCGTGTGTGCCAGATATGGGATCCTCCATATATT GAGAGAGGAAGCTATGGGATCCTCCTTATAGTGAGAGNNNNNNNGCNNNATTATTGTNNN CGTCTGCTTCTTTACACGTGANAGCGAGGGAAATGTGTGGTAGTGAAAAAATTGTTCTAC CTCCTGAATATCTCCAACACTTTTCAGTGGGACAACCCATTCTTGTTGAAGCTTCTTGTC ACGTGCTCGCGGACGTGAGAACTGACAACAAAAGCATTTAGTTCAGCAAACACGCTCACC AGAAGATGTTACATTTAACAATCTATGGGATCCT |
| GenBank Accession | AL952156 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:18264662 - go to primer design |
| BLAST e Value | 3e-97 |
| Hit Clone Code (BAC ID) | F6E13 |
| Hit Gene Code | At2g44160 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | methylenetetrahydrofolate reductase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g07706
| Sequence (A. th genome BLAST matches underlined) | >44-K016162-022-341-D06-8409 TGATCTGTAATTTCCCGGACTGAAGCCATTTACTCTTTCTTCAGTCCTGTTGGATATGTA TACCAAAAGGCTTATCTATAGAATACCCGGATATTTAGAAGGGTGTGATAAGGATGATCC GGTCGTCCCTATTGCATGTGCGTGCCAGCCCATGGTTCCCCTCGGGAGTGCTTGGCATTC CGCGCAATATGGACTTCTGTTCAACCTCCCAACACGTACGAAAGCCTGACGACGGAGACA GCAATTCCTCAATGATCCCTTGGCTCCTCTGGGTCGACTATGAGATCTTCGCTATACTCG AGTAGTGAGTTCATCAAAGTTTAGATACGTCGGAAATTGAAGTTCTATATGTAGAAATCT GTTCTCAGCGAGCTTTGAATCTTTTAATTGGTAGTTGGTTAAGGATTGGAGGAATGGGAG TTAGATCTGCCCCTATGGGAT |
| GenBank Accession | AL952157 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:3383150 - go to primer design |
| BLAST e Value | 3e-35 |
| Hit Clone Code (BAC ID) | T18C6 |
| Hit Gene Code | At2g07706 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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