SimpleSearch - Line and FST details
Line specific information
| Line ID | 343B08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N432852) |
| Segregation Analysis | 50:50:48 |
| Confirmed for Hit | At3g13784 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4153, 4168, 4273, 9944 |
Gene hit At3g13784
| Sequence (A. th genome BLAST matches underlined) | >58-K016164-022-343-B08-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGGATACGTCACC GGTTATTTACATGATGACGTTATACCGGATTCATTAATTCAGTTTCACTTGGTTATCTTT TTATTCCTTTCTCTATAATTTGTGCACATTGTCAAATCTTTTCACTCATTTTGTTTGTTT GTTTATGTTGGGGCTTCGTTTCAATGCTACAAGATCCTAACGGTAAGTTATTATTGCTCT CTCGTTTGTTTTATAAATTACGTATAAGTAAGCATGGATATAACATATAAGTAATATGTA TGTTTATGTACATAAAATTGGACAGGGCCTATGATATACAAAGGAATCTATCATCTATTC TATCAATGGAACCAAAACGGCGCCGTCATGGACGTTAACAAAACCGTATGGGGCCATGCA ACATCAACGGATCTAATCAACTGGATCACACTTTCTCCAGCAATCAGACCATCTCGACCG TCCGATATTAACGGATGCTGGTCCGGCTCCGTCACGATTCTCCCTAATGGCAAACCTGTA ATTCTTTACACCGGCAACGACCGTTATAACCGCCAGGTCCAAAACTTAGTTAAACCTAAA AACCTCACCGATCCATATCTACGGCACTGGACCAAATCGCCGGAAAATCCCCTCGTGACA CCTAT |
| GenBank Accession | AL952407 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:4530510 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MMM17 |
| Hit Gene Code | At3g13784 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cell wall invertase 5 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MNJ8
| Sequence (A. th genome BLAST matches underlined) | >58-K104615-0022-343-B08-8409 GAGCATTTACATTGAAATATCCTGATTAATCCACCGATCTTAAAAAAAAATCCAACTTTC TACTTTCTCTTTCTAAATGAAACAATTCCATATTTTTCATTTCATTTATACATCATACAC TTAATTAATGATATTCTCTTTCTATGGGATCCTCCCTATAGTGAGACGTATTACTCCCCG CCCTAGGGGGACTTGGGGGTACAAGGGGTTAGGGGCCCTCGGGGGTAGGAGAAATAAGGG ACCTATGGTGATCGGGGGGGAGGGGGGTCGGGGGGGTTTGGG |
| GenBank Accession | FR808282 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:14767130 - go to primer design |
| BLAST e Value | 9e-46 |
| Hit Clone Code (BAC ID) | MNJ8 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | AL952406 [GenBank] FR808283 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
