SimpleSearch - Line and FST details


Line specific information

 
Line ID 344B01
Vector Used pAC161
Line Availability available as T3 set from NASC (N432941)
Segregation Analysis 50:33:31
Confirmed for Hit At2g32295
Parent of DUPLO pair 12448
Parent of pair(s) none

Gene hit At2g32295

 
Sequence (A. th genome BLAST matches underlined) 
>02-K016232-022-344-B01-8409
GATCATGTAGATTTCCNGGACATGAAGCATTTACAATTTGATATATCTCTGGCTAATCTC
GGTTAGTTTTTGTTTTTATAATAAACTCTTGGCTGCTACTGGGATCCCTCCCTATAGTGA
GenBank Accession AL952529 [GenBank]
Graphic View Graphic view of gene At2g32295
Predicted Position of Insertion Chr2:13719600 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) T32F6
Hit Gene Code At2g32295 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation EXS (ERD1/XPR1/SYG1) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g06656

 
Sequence (A. th genome BLAST matches underlined) 
>02-K016238-022-344-B01-8409
CCCTATCGCATCCTCCCTATAGTGAGATAATAAATCTTGGCTACTATGGGATCCTCCCTA
TAGTGAGACTTGTTAAGGCCCTTCCCGTAGGAGGCGGCGTCGACGAGCATACGTATCTTA
AGCAGGACGCCTCTGTATAGCGTACTGAGAATATATGCTTCCTTATATCCATCATAAGGG
TATTAGGTAATGATAACCCTTACAGCGATCCAAAGCTTCACGGAAACTGTCATTTTGCTT
CTGAATGAATCCGGATAAGTCGCTCCGGAGCCCTGACAACTTATAGCATCCTACCTGCAG
TGAGAAGGACCACTAGAAAAAACAGATGCTCATCTAGTCCAAACATAAAAAACTGCGGAG
AGCGCACCGGACCACACCATCTACCCACCTCGCAACACTATAAAAAAAAACGAGTGGTAG
CACAAAAATTCTCTGAAAAAAAGAGACAAAAAGGCCAAGCAGGGAAAGGGACGCTTTAGA
ATTATCCGTGAACCCCTGTTTGTAAAGAAAAGGATTGCCCTGTGGGACAAAAGCGTATCC
GGTAAGAAGACAAATATAAGCTACACGCCCCGAGAGAGCGAACCAAAAACAGACATGTAG
TCCCATAGCAGAACCCGGTGACTACACAGCCCTCAAATCCCAAAATCATCGCAACCACAC
CTATAAGAAGAAAGAAATGGGAGGGAAAATTGGTA
GenBank Accession FR808406 [GenBank]
Graphic View Graphic view of gene At4g06656
Predicted Position of Insertion Chr4:3849637 - go to primer design
BLAST e Value 2e-33
Hit Clone Code (BAC ID) T7K6
Hit Gene Code At4g06656 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status unknown


Last Updated on 10.06.2021 13:37