SimpleSearch - Line and FST details


Line specific information

 
Line ID 344D04
Vector Used pAC161
Line Availability available as T3 set from NASC (N432968)
Segregation Analysis 50:35:27
Confirmed for Hit At5g20250
Parent of DUPLO pair none
Parent of pair(s) 33546, 79973

Gene hit At5g20250

 
Sequence (A. th genome BLAST matches underlined) 
>28-K016232-022-344-D04-8409
TGTCCTGTAGATTTCCCGGACATGAAGCCATTTAAATTGATTAAACCGACTGATAGACGA
CGCGTTGGCATCCGATGAGGAGACAGGCTATGACGCATGGCGGAGATGACAAGAAAGACC
CTCCGACTTCTCGAATGGCATCGATCATGGATATCGGAGAGACAAGAGTGAGGAGGTCCC
CCACGTTGACATTAATAATCTTGTCGACATTGCTACGGAAAAACCTCGGTTGAAACAGGT
CTACGTGCGGCACGCCATAACCGGTTATTGCCGCGAATTGAAACCCGGACACCAAGACAG
ATGTGGAATCACATATCCTACTTCGTCCNAATAGGTGTGGTGGAGAATGATCCGACGTGG
AAGACTGATGTAATGACGCTGCAAGGGTTGGGTTTGGTTAGCCCCAAGAAAGTGTATAAG
TTTTACAATGAGCTTCATAGTTACTTGGCTGATGCTGGCGTGGACGGTGTGAAAGTGGAT
GTGCAGTGTGTATTGGAGACTTTGGGTGGTGGTTTAGGCGGTCGGGTTGAGCTGACTCGT
CAGTTTCATCAAGCTCTTGACTCCTCTGTTGCTAAGAACTTCCCGGATAATGGCTGCATT
GCTTGTATGAGCCATAATACGGATGCTCTTTACTGCTCGAAGCAAGCAGCTGTGATTAGA
GCTCGNAATGATTTCTATCCCCGGGGATCCGGTGTCTCATACCATCCATATAGCCTCCGT
TGCTTATAACAGTGTGTTCCTGGGGAGAGTTTATGCAGCCTGACTGGGATATGTTCCATT
CCGTGCACCCTGCTGCAAATATCATGCTCTGCTATGACCCC
GenBank Accession AL952560 [GenBank]
Graphic View Graphic view of gene At5g20250
Predicted Position of Insertion Chr5:6834934 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F5O24
Hit Gene Code At5g20250 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Raffinose synthase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37