SimpleSearch - Line and FST details


Line specific information

 
Line ID 344E11
Vector Used pAC161
Line Availability available as T3 set from NASC (N432987)
Segregation Analysis 50:50:39
Confirmed for Hit At2g22460
Parent of DUPLO pair 12885
Parent of pair(s) none

Gene hit At2g22460

 
Sequence (A. th genome BLAST matches underlined) 
>85-K016232-022-344-E11-8409
TTTCCCGGACTGAACCATTTATCTTCATTGTCCATCATCAGTCTGATTTGATTACCCGTG
GAGATGCTCGTACATAAGAGTTCTGTTTTCAAGTTTCTTTCCTTTTATTTTTTCCTTGGG
TCTATGGGATCTCCCCTATAGTGAGANNANNNNNANNGNGNNNTTACCNTTTTTTTTTCA
ATTCAAAAATGTACAGGCCCGCACCTAATATAATAANNNNNNNNNCNNCNNNNNNNNNNN
NCNGNCNNCCCCNCGCCCTCCGCCTCCCTGCGGCCCCCTCGCCCCCCCCCCCTCCCCCGC
CTCCCTTCTTCGCCCCGGACACCAAAGGACGCCCCGGGGGTTGTGTTGCATTCCCTTCTC
CCCCTCGCCACACACCCTCCCTCTCGACCCCAAACAACCATCCCAACGCACCACCGCCAT
CCCCCGGCCAATCACAACACCAAGTAACCCAATCAATAAACCAGCATACACCCAACCCCC
ACCGAACCCCCCCACCGCGACTCCCAATATCCCAACCCCCCCCCGAGAAAAACACCCCCA
CCCCCACCATCCTAATTCCCCACCCCCCTAACCACTAAACCATCCCCCCATTCCCATTGT
CCCCCCAAATACCCGATACAACCCCACACAAAAAAAACACCGACCCAAATCGGCCGAAAC
ACATGCCCCCTCGCCCACCCAACCCACGCGGCATTAAACCCACCGGCCACACGCGCGCCC
CCTGAACCACAAACGCCCCACCCACCAAACATACCACACCCCCAACCCTCGTCTGAAAAT
AAACGCAACCCAAACACACCAATGAAATAAACCGACCACACCCTTCGCCACCACCCCCCC
CCCTACCCACACCAACCAAGCAAAAAAGGGCCAACTAACACAA
GenBank Accession AL952585 [GenBank]
Graphic View Graphic view of gene At2g22460
Predicted Position of Insertion Chr2:9533381 - go to primer design
BLAST e Value 3e-48
Hit Clone Code (BAC ID) F14M13
Hit Gene Code At2g22460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL952586 [GenBank]


Last Updated on 10.06.2021 13:37