SimpleSearch - Line and FST details


Line specific information

 
Line ID 345A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N433032)
Segregation Analysis 50:44:28
Confirmed for Hit At5g40645
Parent of DUPLO pair none
Parent of pair(s) 89175, 89184

Gene hit At5g40645

 
Sequence (A. th genome BLAST matches underlined) 
>57-K016233-022-345-A08-8409
TATCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGAAATGAAAG
CAAAAGCAGACGAAGCAGACGAAACATTTGGGACAATTGAGAAACAACACATCATCAAGC
AAAAGCTGAATGTAAAACATTTGTTAGATAAATGAAACAGTTTCATATTCACTTGGAATC
TGTATAAATTTATCATTACAGAGCTAAAAGCAGACGAAGTTTCGGTCTAATTCTGGTCGC
ATAACATTTACTTACACAATATCAATGTCTCTTAACCCTCTGTTTGGTGAATCTTGATCT
GACCCATTGCTACTTGTCTTTTTCTTGAACGATTTTTGGCTGAAAATCCGAGACACCGTT
TTCCCGGGACGTGGAACTGATCTCGAACCGCCTTCAAAACGGTTATGTTTATTGTCTATG
GGAT
GenBank Accession AL952649 [GenBank]
Graphic View Graphic view of gene At5g40645
Predicted Position of Insertion Chr5:16280451 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MNF13
Hit Gene Code At5g40645 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RPM1-interacting protein 4 (RIN4) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37