SimpleSearch - Line and FST details


Line specific information

 
Line ID 345B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N433047)
Segregation Analysis 50:44:35
Confirmed for Hit At5g46240
Parent of DUPLO pair 2631
Parent of pair(s) none

Gene hit At5g46240

 
Sequence (A. th genome BLAST matches underlined) 
>82-K016233-022-345-B11-8409
TATCCTGAAATTTCCCGGACATGAAGCCATTTACATTGAAATTTGGATACACAGCTCCAA
TCCATGTCTTTCTTGGATTAGGATATCTATCTGCAATCAGGTAGTTGAAACATCCAGCAC
AATGTATAGCGAACAAAGTGACCTGAGATCAACAAGCACGTGTAAGTCGCTATGGGATCC
TCCCTATAGTGAGAGACATAGCATGAGAATCGCATTCCTGTGAAGTAATTACTATAGAGG
GTATAAAGCTCTACTCCGGATGTGGAGGCATAATAAAGTATGCAACGTTTCGATGCCTGC
TTCCTGCATGACTTTGGTAAATGGTCAGCTCTCACGATCTCATCTTTAAGATCATTCCTG
CTGGAGATCGTGCTCTTTCGACTGTCAATTTCAGCTCTGTATCGGTTTCTGTGTATGGCA
TAGCATTACCTTACGTCCCTGAGACTCTGTACAGCATTTTACTCTCTGGAGATGATGGGC
CCCCAATTCGTGTTGGGGTTTTTCCACTAGTGAAGAGTGCATATGCTATGGCATCCTCCC
TAAAGTCAGCAGNCCCAGATTTACTGACACTGTTCTAAAATTGTTGTTCCAGGAACTTAA
CTAGTATGGGAGCTTCAAGTTCGCTA
GenBank Accession AL952665 [GenBank]
Graphic View Graphic view of gene At5g46240
Predicted Position of Insertion Chr5:18745358 - go to primer design
BLAST e Value 3e-69
Hit Clone Code (BAC ID) MDE13
Hit Gene Code At5g46240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37