SimpleSearch - Line and FST details


Line specific information

 
Line ID 345D05
Vector Used pAC161
Line Availability available as T3 set from NASC (N433065)
Segregation Analysis 6:4:2
Confirmed for Hit At5g62880
Parent of DUPLO pair none
Parent of pair(s) 5756, 5758, 5759, 5777, 7652, 8730, 81921, 81925, 81926, 81927

Gene hit At5g62880

 
Sequence (A. th genome BLAST matches underlined) 
>36-K016233-022-345-D05-8409
TGATCTGTNATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGACTCAATAAGA
ACAGTCATATAACATTAGAAATGACTCATTCTGACACTATAAGAGTCTTATCGTTTTCAA
CAATTAGAGAAAAGGATCATTTATTCAATCAGACCTTTTTAAAAACATTCTCGTAGCTAT
GGGATCTCCCCTATAGTGAG
GenBank Accession AL952689 [GenBank]
Graphic View Graphic view of gene At5g62880
Predicted Position of Insertion Chr5:25238250 - go to primer design
BLAST e Value 3e-69
Hit Clone Code (BAC ID) MQB2
Hit Gene Code At5g62880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RAC-like 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T15C9

 
Sequence (A. th genome BLAST matches underlined) 
>36-K016239-022-345-D05-8409
GATCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAAAGGAAAAAAGAGTGAGAC
TATTAACTACATATATGAAAGTTCTATTAGAGTCAAACAATTAGTAACTAAAATAAGAAT
TCTAATTAATATATGATAGAAATTTCCCACTTGATTAAATTTAATATGGTGAATACTTAG
ATTATGGATTTAGCGAATCTAAGAAAAACTTATTAAAAAAAAATAAAAAAAAATTAAAGA
CATATTTAATTCCCTATGGGAT
GenBank Accession AL952690 [GenBank]
Graphic View Graphic view of sequence AL952690 of line 345D05
Predicted Position of Insertion Chr3:20395819 - go to primer design
BLAST e Value 4e-96
Hit Clone Code (BAC ID) T15C9
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37