SimpleSearch - Line and FST details


Line specific information

 
Line ID 345D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N433071)
Segregation Analysis 50:47:34
Confirmed for Hit At2g21050
Parent of DUPLO pair none
Parent of pair(s) 6988, 9644, 97578

Gene hit At2g21050

 
Sequence (A. th genome BLAST matches underlined) 
>84-K016233-022-345-D11-8409
CTCCTTCTACTATTTTTATTATTCCCACATTGGTACGTTACATTATTCTCCTTCTATAAG
AAAATTCTATTATCTACCACTCGTACATGTATATAACAGTGATGCATTACACTAAGTCTG
ACACACCACTGCTATGGGTTCGGGTATAGTGGGGGCATACCTCGTGTTGCTTGAAACTGA
AGTGGCCCACTACACTATTCATTGAGAGAGCTTTGTTGATGGTTTTAAATACCCTGAATG
CTCTGCGTAACCATCTAATCTAATCTTTAACTCACTGAAACTAATTACATTACAGAATGA
CCTAAGCGATGCTCTCTGCATCGGGAGTTTATTGGGCGTTTGGTGATTTGCTTCTAAACC
ATTCAAACGCATTTGCTCTTCTCCCAAAGAATCTTTACCGTGACTTTGCAGTTGTGCTTA
TGCTCATCCATCAGTTCATCACCTTTGGTTTTGCTTGCACGCCACTCTACTTTGTGTGGG
AGAAGCTAATAGGGATGCATGAGTGCAGAAGCATGTGTAAACGAGCCGCTGCGAGGCTCC
CTGTCGTTATACCCATTTGGTTTCTTGCTATCAATTTCCCGTTCTTTGGTCCCATTAACT
CAACCGTAGGATCTCTTCTCGTCAGCTTCACTGTCTACATCATCCCAGCGCTATGGATCC
CCCC
GenBank Accession AL952698 [GenBank]
Graphic View Graphic view of gene At2g21050
Predicted Position of Insertion Chr2:9035545 - go to primer design
BLAST e Value 8e-178
Hit Clone Code (BAC ID) F26H11
Hit Gene Code At2g21050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation like AUXIN RESISTANT 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL952698 [GenBank]


Last Updated on 10.06.2021 13:37