SimpleSearch - Line and FST details


Line specific information

 
Line ID 345H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N433115)
Segregation Analysis 50:50:36
Confirmed for Hit At1g50580
Parent of DUPLO pair none
Parent of pair(s) 4397, 4470, 5252, 7358, 7546, 7570, 10059, 10264, 10269, 10918, 94006, 94016, 94020, 94029, 94030

Gene hit At3g50280

 
Sequence (A. th genome BLAST matches underlined) 
>56-K016233-022-345-H07-8409
AGTAAGCTATCCTCTTCATTGATGAATACCCTCTCATCACGTTCGCCTTTACCATCATAC
TAATCCTTTTCAAGCGTAATTAAGCTATGGGATCCTCCCCAATACTCGAGATTTTTTCGT
GGGATTGAAGAAGGCTGTATTGATGTTCATGCGTTTCTATTGCCCGACGTACTTGTGAAA
CTACTGGCTGACGTGGAATTTCTGGAGAAGTGTGGCTATGGGATCTCCCCCAAAAGAGAG
ANATCTTTCTTTTAGTTGTTGAATCTCTCTTTGATTGATCAATGTGTGATAGTGATATTC
CGAATCCTCATTACTAATGGAATCGAAAGGATCTATGAATTGATCAGAAGATCCGTTCAA
TTGGCTATGGG
GenBank Accession AL952775 [GenBank]
Graphic View Graphic view of gene At3g50280
Predicted Position of Insertion Chr3:18638716 - go to primer design
BLAST e Value 1e-53
Hit Clone Code (BAC ID) F11C1
Hit Gene Code At3g50280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HXXXD-type acyl-transferase family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g50580

 
Sequence (A. th genome BLAST matches underlined) 
>56-K016239-022-345-H07-8409
TGTCCTGAAATTTCCCGGACATGAAGCCATTTACATTGAAGAATATTGCTGTCGATGGTC
TCCCTTTTGGCGCCGAGACAGCCTCGGATCTCCCAAACTCAACTAAGAAACCCATATTCG
TTGCCATGGATCTCTTACGCGATCAGATCGAAGCAAAGGTCCGTGCTTTGAAACCAGATC
TAATCTTTTTCGATTTTGTTCATTGGGTTCCAGAAATGGCAGAAGAGTTTGGAATAAAGA
GTGTCAATTACCAGATCATATCGGCAGCTTGTGTAGCTATGGTTCTTGCACCTATGGGAT
CCTCCCTTTATAGTGAG
GenBank Accession AL952776 [GenBank]
Graphic View Graphic view of gene At1g50580
Predicted Position of Insertion Chr1:18731027 - go to primer design
BLAST e Value 1e-136
Hit Clone Code (BAC ID) F11F12
Hit Gene Code At1g50580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-Glycosyltransferase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37