SimpleSearch - Line and FST details


Line specific information

 
Line ID 346F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N433188)
Segregation Analysis 50:34:25
Confirmed for Hit At1g27180
Parent of DUPLO pair none
Parent of pair(s) 11674

Gene hit At1g27180

 
Sequence (A. th genome BLAST matches underlined) 
>62-K016240-022-346-F08-8409
TTTCCCGGACTGATCGCGGTGACATGAAGGTTATTTATATCTATATCTTCGTTTATATAT
CATTTGTGTTTGACTTACATTCTCACGACCGTGTTTTTTTGTAATGAGATAACAGGGAAC
ATCATCCATTCGAGGAATCGAACTATGGGTATCCTCCCTATAGTGAGACCACAGAGTGTC
GGCTGTCAAGATTGTAAGGAGAGATTTCTGTATAAGAACACGGAGAGCAGCCTCGGCGTT
TAACCCACATCCTTTCAGTATGTCGACAACTTCTTCTTTTGTTATATCCATTTTGAGAAA
GAGACATGCAATGTCGAGGAATATCTTCTTTTCTTCTTCGTCTAAAGATTTGAAACTCAG
AGCCAGAACACCGTGAAGTTTGTCTTGTTGGGTTTTCAGCTTCCCTATGGGATCCCCCTG
AATAGTGAGANNAAAANGGTAGGANTAACCAGCCCCTGTTTCCACATTGGGAACCCTCGT
GGGACCACCATGTAAACCAGCATTGGCAGGGCACTGGGGCTTCCACCTA
GenBank Accession AL952869 [GenBank]
Graphic View Graphic view of gene At1g27180
Predicted Position of Insertion Chr1:9443013 - go to primer design
BLAST e Value 1e-127
Hit Clone Code (BAC ID) T7N9
Hit Gene Code At1g27180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation disease resistance protein (TIR-NBS-LRR class)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL952869 [GenBank]


Last Updated on 10.06.2021 13:37