SimpleSearch - Line and FST details


Line specific information

 
Line ID 346H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N433205)
Segregation Analysis 50:47:33
Confirmed for Hit At2g21727
Parent of DUPLO pair none
Parent of pair(s) 95397, 95403, 95404

Gene hit At2g21727

 
Sequence (A. th genome BLAST matches underlined) 
>08-K016234-022-346-H01-8409
TGTCCTGTAGATTTCCCGGACTGAAGCCATTCTACATTGAATATATCCTGAAACTAATGA
AATATGGAACATGTGTTCTACTGATAATTAATGTTGTTTCACCATTTTCTGGGTAAAAAA
TATAACGAATTTTATTATTTGAACAATAATATATAACTTCCCATGGTATATTATCTTTCT
ATATCTATGGGATCCTCCCCTATAGTGAGAGCTCACCACCCGCGCTTCGGAAACGCCTGA
CGACGCCGCATCATTCCACAAAGCTCCCCTGGGGCGAGGGGGTCGCCTATGGGATCCTCC
CTATAGAGAGATCTCCTCCACTATGCTCTCCCCTTTCTCGCTGTGGTGGCTTGTGCGAGA
CCCCCCCTCTTTCCCCACTCTCCTCACTATAGAGCCACACAGCTCTGCGCTGTGATCCCC
GAAGAGGTCCCCAGATATCCCCCTGTGGAAAAGACTCTCTAGCGCCCTGGGCTCCTCAGA
CACTGTCTCTGTGATATTTGGAGAATACACAAGCGTGTCGCGCTCCCCCGTGGACACGAA
TATTCTCCTCGTCGTCTAGACGCAAAAGACACTCTG
GenBank Accession AL952890 [GenBank]
Graphic View Graphic view of gene At2g21727
Predicted Position of Insertion Chr2:9278637 - go to primer design
BLAST e Value 3e-69
Hit Clone Code (BAC ID) F7D8
Hit Gene Code At2g21727 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ECA1 gametogenesis family protein (DUF784)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL952891 [GenBank]


Last Updated on 10.06.2021 13:37