SimpleSearch - Line and FST details


Line specific information

 
Line ID 346H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N433211)
Segregation Analysis 50:38:27
Confirmed for Hit At5g59240
Parent of DUPLO pair 1931
Parent of pair(s) none

Gene hit At5g59240

 
Sequence (A. th genome BLAST matches underlined) 
>56-K016240-022-346-H07-8409
TTTCCCGGACTGAAGCATTAAGAAAAAATGTGGAGGAAGAAGCGAAAGTAAGCTTTTTAA
TCTTCCCCTGCTTAAATATTGAATCATAGAGTAGATTGGAATCAAAATGAATCATGAGCT
TGTCTTGTTCTTTAATTTTGGTTGTTTCTACATGCTTGATAACTTTGTATAACTTCTGGT
TGAAGCAAAATTGATGATCACATAAACTAACTTTGGTTATCTCTTATAAAGGTATGAGCT
TGGAAGACAACCAGCTAACACTAAGCTGTCAAGTAACAAGACGGTGAGGAGGATCCGTGT
GCGTGGTGGGAATGTAAAGTGGCGAGCTTTGAGGCTCGATACTGGAAACTTCTCGTGGGG
AAGTGAAGCTGTGACCCGCAAGACTATGGGATCTCCCNAAAATAGAGAGAGATGAATCCG
ACCCCTTTGGAACGTGTTCTAACAACATGATATAAAATGAAGCTGGCGATCAAATGAAAT
ACCGAGCACACGAATGTTCATCACAGACGCGGAATCTGTGAATTCAATCTTACCCCACAG
AGATGCATGCAGATAACCTCACTTTGAGGTGAACTTACTTGCGTACCTCAACATCCACCT
ATGGGATCTCGCATAATCTTGAGTGCCCTAATAAATTAAATGAAAACGCCTA
GenBank Accession AL952901 [GenBank]
Graphic View Graphic view of gene At5g59240
Predicted Position of Insertion Chr5:23903491 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MNC17
Hit Gene Code At5g59240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein S8e family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL952901 [GenBank]


Last Updated on 10.06.2021 13:37