SimpleSearch - Line and FST details


Line specific information

 
Line ID 348E03
Vector Used pAC161
Line Availability available as T3 set from NASC (N433363)
Segregation Analysis 50:48:43
Confirmed for Hit At5g12270
Parent of DUPLO pair none
Parent of pair(s) 3664, 3693

Gene hit At5g12270

 
Sequence (A. th genome BLAST matches underlined) 
>21-K016243-022-348-E03-8409
TGTCCTGAAATTTCCCGGACATGAAGCCATTTACATTGAGTTATGGTTTTCACATCGATT
TTTTTGAATCAAATTACTATTTTTTATCTTTAAAATGGGGGCAACTATGCTTACTATGAA
GAGGGAAGGTCTCGAGGCCTTTAATTTATGTTTTTGAAAAAAATACTCGGACTTGAGGAA
ATCTCCCCATTCCAGAACACTTTCTATGCAAGGATTGAAACTTGTGGTCAACCACGCCGT
CTCCGACACTGAACTCCCTCTCCAATACCTTCTTCTCTCCTCCGCCGGCAACTCGAAAAA
CCCACGCGCCGCAGCAATCACACCCTTGAACTCAGCCGGAGCTATCCCGTGGTTCACTAT
CTGAAACAAGCCGAGCTTTGACGCTGCATGGCAGATCTCTCTATGGGATCCCCCCTAATA
GTGAG
GenBank Accession AL953093 [GenBank]
Graphic View Graphic view of gene At5g12270
Predicted Position of Insertion Chr5:3970748 - go to primer design
BLAST e Value 4e-124
Hit Clone Code (BAC ID) MXC9
Hit Gene Code At5g12270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL953093 [GenBank]


Last Updated on 10.06.2021 13:37