SimpleSearch - Line and FST details


Line specific information

 
Line ID 348G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N433392)
Segregation Analysis 50:50:47
Confirmed for Hit At2g37200
Parent of DUPLO pair none
Parent of pair(s) 12472

Gene hit At2g37200

 
Sequence (A. th genome BLAST matches underlined) 
>63-K016247-022-348-G08-8409
TATCATGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGAAAAGGACATTG
AGTAGGCTAAACGATTACTTATACAACTTCACTTACTAGGGGAATCGACCCAACTACATT
TTAGTACTCTCTTTCTTTTTTGGTTCTTTAATTTTAATCTATTTTCCAGACTGAAAACGA
ATATTAACACTACAGAAGAAACCGCACATGTTGTTTGTATTTTAGGCCTACCAATTCGGG
ACCATGACCATTGTTTCCTTATTGTTTCCGAAGGAAGCACCCCATAAACCGCGCACTTGG
TTGTTCAATGTTTCATTTTTGATGTGTTAATTAGTAAGTGGAGTATCGTGACTGACGGTT
TTTTCATCCCCTATTGTGTTGCAGGTCACATCGACGCTCACGTTTGCAGCTGCATCTGCT
TCTGCTGGCATAACTGTACTCATCAACGATCTTGGACAATGTAACGTGAATCACTGCACA
AGGTTTGAGACTGCCACAGCAATGGCCTTCATCAGCTGGTTTGCTGTGTCTCCTTCCTTT
ATTCTCAACTTCTGGTCCTTAGCCACCCACTAAATATATAGCACACAAGTTGAGTTCAGA
GAAATCCATCTTCCTATGGGAT
GenBank Accession AL953139 [GenBank]
Graphic View Graphic view of gene At2g37200
Predicted Position of Insertion Chr2:15622612 - go to primer design
BLAST e Value 3e-180
Hit Clone Code (BAC ID) T2N18
Hit Gene Code At2g37200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Uncharacterized protein family (UPF0497)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL953139 [GenBank]


Last Updated on 10.06.2021 13:37