SimpleSearch - Line and FST details


Line specific information

 
Line ID 348H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N433402)
Segregation Analysis 50:50:39
Confirmed for Hit At5g59820
Parent of DUPLO pair none
Parent of pair(s) 7025, 7041, 83508, 83509

Gene hit At5g59820

 
Sequence (A. th genome BLAST matches underlined) 
>48-K016243-022-348-H06-8409
GGACTGAAGCCATTTACATTGAATATATCCTGTCCAATCTACATATGGGCTGCTGGTGGC
GCGTTGGTTACACGCGCTTTGTTGCCGGAGCCCACGGTGACTACGTTGAAGAATCTATGG
GATCTCTCCTATAGTGAGANNAAAANNAANGAGCATTCCCCCTTTTTTTTCCAATTCAAA
AAGGAAAATGTCCCCCCCGTATTTAATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNCN
NNNNNNNNNNNNNNNNNNNNNNNNNNCNCNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNN
NNNNCNNNNCNCCCCNCNCNCNNNCCCCNCCCCCCNNCCNCCCCNCNCCCCCCNCCCCCC
CCCCCCNNNCCCCCNCAACTCCCCCCCNNNCTCTTTATATNCCTCCCCNCCCCCTNTCTN
TTTNCCCCCCCCCCTCCCCTCCCCCCTTCCCTCTTCCCTCCCCCTCCTCCCCCCCCCCTT
TCCCCCTTCCCTTTTCCCCCCCCCCTTCTCTTCCCCCCCCCCCCCCCTCCTCNCCCATTT
TTTCNCCCCNCTATCTCCCCTTCACCTCTTCCCCCCCCTTATCCCCCCCCATATACTCCC
CTACACCCATACCCCCCCAAAAAACTCCACTATTCCCTCCATCCCTACAACCGCCACCAC
ACCCTACCTCTCCTTTCAACATTCATTCATCCCTATCCCCTCATCCACCTCACCTTTTTC
CTAACCCATTCAATATCCACCCATACCATCCTACAATATACATGAGACACAAACT
GenBank Accession AL953152 [GenBank]
Graphic View Graphic view of gene At5g59820
Predicted Position of Insertion Chr5:24103396 - go to primer design
BLAST e Value 8e-30
Hit Clone Code (BAC ID) MMN10
Hit Gene Code At5g59820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2H2-type zinc finger family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37