SimpleSearch - Line and FST details


Line specific information

 
Line ID 349A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N433414)
Segregation Analysis 50:50:40
Confirmed for Hit At5g43810
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At5g43810

 
Sequence (A. th genome BLAST matches underlined) 
>41-K016248-022-349-A06-8409
TGAAGACTTTGCAATTGAGTATGAATTTTGGAGTCGGGATATTCTCCCTTTAATGCAATC
TGACATTTTCTTATAATTATTTTTTGTTTGTACTTATTTTTCTTTCATCCTCATGATTTT
GCAGGTAGAATAAGGCCAAGGAAGGGATCAGTTTTAAGTTTTGTTTCATTCTTTTTGTAG
TGGAGAAAAAGAGTTTTTGAAAATCCAAACAACAAAAAATGCCGATTAGGCAAATGAAAG
ATAGCTCTGAGACTCACTTAGTTATCAAAACCCAACCTTTAAAGCACCACAATCCAAAAA
CCGTTCAAAACGGTAAAATCCCTCCTCCTTCTCCTTCTCCGGTGACGGTGACTACTCCGG
CGACGGTTACTCAGAGTCAAGCTTCTTCACCTTCACCACCGTCAAAGAATCGTAGCCGGA
GGAGAAACCGTGGTGGAAGAAAATCTGATCAAGGAGATGTTTGTATGAGACCTATGG
GenBank Accession AL953165 [GenBank]
Graphic View Graphic view of gene At5g43810
Predicted Position of Insertion Chr5:17611757 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MQD19
Hit Gene Code At5g43810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Stabilizer of iron transporter SufD / Polynucleotidyl transferase
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g07689

 
Sequence (A. th genome BLAST matches underlined) 
>41-K016244-022-349-A06-8409
CATTAAATTTATATCAAATCAACCTTTGCACAGTGAAGTNAAAATGTTGTTGTTCTATGG
GATCCTACTTATAGTGAGACTAGACACAATTTGCCGTAATGCTGAATCTATGGCGAATGC
ATCCATCGTCACTAATGCATATATAAAGATACCAATTATGAAAGACTGAATTCCTTCTAT
GGTTCCACATGACCAAACCAGTACGAATATAACCTACATGCCATATTGAACTATGAGCTA
TGGGATCCTCCCTATAGTGAG
GenBank Accession AL953164 [GenBank]
Graphic View Graphic view of gene At2g07689
Predicted Position of Insertion Chr2:3336506 - go to primer design
BLAST e Value 1e-46
Hit Clone Code (BAC ID) T18C6
Hit Gene Code At2g07689 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NADH-Ubiquinone/plastoquinone (complex I) protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37