SimpleSearch - Line and FST details
Line specific information
| Line ID | 350A06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N433510) |
| Segregation Analysis | 100:96:75 |
| Confirmed for Hit | At3g28080 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4145, 9896, 9926, 84797, 84803, 84804, 84805 |
| Note |
Gene hit At3g28080
| Sequence (A. th genome BLAST matches underlined) | >41-K016249-022-350-A06-8409 TTTCCCGGACTGCACTGTCACTAATAGGCGCATTTGTGGTGATTTTCTACCACGGTCCAC GTGTCTTTGTCGCATCTTCTCCACCATATCTAAACTTCCGTCAGCTTTCTCCACCGTTGT CATCGTCAAAGTCTGATTGGCTCATCGGAGGAGCTATTCTTACCATACAAGGCATCTTCG TTTCTGTTTCTTTTATTCTCCAGGTACACCACTTTTTATAATAAAAATATAGTAGAAACT CTATAAATTAATACTCGATAAATTAATAAACACGATCAATTAATAAATTATATCGGTTCT AAGTCGGGTCAATAGAAAAATTAACCAAAATCGATAAGATAATAAGATAATAAATTTTTT GAAATCTCTATGTAAAAATATGATCTTAATAATATCATAAATTAATAATCATAATATCTT AAGCATACTTTTTAAAATAATCTACTATAATATGANATTTAGTGTTGCTTGTCTTTTTTT AAAGTTTGAATCTTGTTGAACTTCATCTCTAATTTTCTTTTTATTGCATCAAAAACTCCT A |
| GenBank Accession | AL953296 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:10453435 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MMG15 |
| Hit Gene Code | At3g28080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nodulin MtN21 /EamA-like transporter family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g39270
| Sequence (A. th genome BLAST matches underlined) | >41-K016245-022-350-A06-8409 TATCCTGTAATTTCCCGGACATGAAGCCATTTACATTGAATATGATGGCTATGGTATCCT CCCTATAGAGTATGACCTCATCACCTGTGCTGATGCTCCATGCTGCGTTCGATGATACGG TATCTGCTCCTCTTCTTTCCGCTCACTTACTCGTACTCTTGACACTCTGATATGTTTTGG TCGCTATGGGGAACTAACAAGAGCTGTTTAAAGATACTAGATGCACCGTGGATTGGGATC ACTATGGAACCCTCCCTATAACTTGCTATGGGATCCTCCCTATAGTGAGANCTATGAGGA ACGCCGAGGAGAGATGAGAGACGACAGGCATAGGTTCCTTTACCAACACCAGGACATCCA AGAAACACCCAGTGGAAATTTCTGCCTTTGTATGGAGACGTTGACGTACACGAAGACTTC CCGAGCTGAGCCGCAGCCTCCTCCAGATCGATTTTGGGGTCTATGGGATCCTCCCTATAG TGAG |
| GenBank Accession | AL953295 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:16400493 - go to primer design |
| BLAST e Value | 1e-84 |
| Hit Clone Code (BAC ID) | T16B24 |
| Hit Gene Code | At2g39270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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