SimpleSearch - Line and FST details


Line specific information

 
Line ID 352E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N433748)
Segregation Analysis 50:49:46
Confirmed for Hit At5g15180
Parent of DUPLO pair none
Parent of pair(s) 1887, 3524, 3541, 76325, 76380, 76465, 76492

Gene hit At5g15180

 
Sequence (A. th genome BLAST matches underlined) 
>29-K016360-022-352-E04-8409
ATTGATATATCCTTACCGCACCATTGCGTCTCTATTGGATCCTCCCTATAGTGAGAACAT
GGCGATTATAGACATCATAAATAGGGTTGGGCGTATTCTTCTATTTTTTTGATGCTACAA
AATGCACTTGACTTAAATTTTCAAGAGGCTATGGGATCCTCCCTATAGTGAGAGGCTGTA
ACATCCTCTTTATCCACAGTGCTCCTCGTGGGTGGGGGTCCATCTTTGGGACCACTGTCG
GCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAGGAGCCA
CCTTCCTTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAATCCGAGG
AGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCTGAGACT
GTATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATT
TTCTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCGCCAGTCTTTACGGCG
AGTTCTGTTAGGTCCTCTATTTGAATCTTTGACTCCATGGGAATTGGGGATCCTCTATGG
GATCCTCCCTATAGTGAGAGGNANCCNANCNCGNCCGCGGNGTTGGAATATTCCGGGAGC
CGGTAAGGCCATACGCAAAAACGGGGCCACGCGGCGCTGAAAACATACTACTGCGGAAAA
GCAACAATCGAGCGCGCTATCAAACGCGGATGATGAAGAAAAGAAGA
GenBank Accession AL953593 [GenBank]
Graphic View Graphic view of gene At5g15180
Predicted Position of Insertion Chr5:4931126 - go to primer design
BLAST e Value 1e-31
Hit Clone Code (BAC ID) F8M21
Hit Gene Code At5g15180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL953593 [GenBank]


Last Updated on 10.06.2021 13:37