SimpleSearch - Line and FST details
Line specific information
| Line ID | 353E02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N433842) |
| Segregation Analysis | 6:6:4 |
| Confirmed for Hit | At4g21270 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3512, 9738, 9775 |
Gene hit At4g21270
| Sequence (A. th genome BLAST matches underlined) | >13-K016363-022-353-E02-8409 TTTCCCGGAATGAAGCCATTGCTTTGACATTGGTAATTCAGTCAGGAAATATCATACCAC TCTGAACCAAATCAACACCTCTTCCTTGGGCTTCTGTTGAAGTAGGATAGGCTATTACAG TTGCTTCATGTCGTCCTCCATCGTCTGGTAACAAGGGACGCACTCGGCAGAAGACACGTA TATTTCCTTTTAATTCCTGAATTTACAGCTTCTCTTAGCTCAGATCAAGACAGCCACATA TATAAGGGAAAAAAAAATAGTTTCTTACAAGAATAGGGTTATGAAGCTTCTTCCGCAATA ACTCTCCCTCACACAGTTGATGCTCCATGTCTGCAAGCCGGTCTTGTAGTTCGCACAGTA GATGCTTCTGCTCCTCAAACTCTGTCCTATGGGACTCCCCAAAAAGGGGAGAANNNNNNN NNNNNNNNNTTNCCCCTTTTTTTTCCACTCCCACACTTTAAATTTCCCCCCCCCCCCTAA AAAACNCCCCCCCCTACCCACATTTCCCACCACATCCCCACCAAACACTTATCACCCACC CACCAACATTATAACATCACCCCCCCACCCATAACCACCCAAATTAATCACCACAAAAAT CACCCCACCAAACAATCAACCACCACCCCACCCACAATTCACACACCACAAAAATAATCA AAACTCACACAACCCCCCCCACCAACCCCCCATACAAATACATCAAAACCACTACCAACA ACACCAACCCCTATACACCCTCCCCCTACAAATATTAACAATACAAA |
| GenBank Accession | AL953685 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:11331385 - go to primer design |
| BLAST e Value | 5e-176 |
| Hit Clone Code (BAC ID) | F7J7 |
| Hit Gene Code | At4g21270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | kinesin 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g56950
| Sequence (A. th genome BLAST matches underlined) | >13-K016362-022-353-E02-8409 TGTCCTGAGATTTCCCGGACTGAAGCCATTTAAAAAAAAAGAAGGGCAGTTGTTAGGTTT AAATTTTATAAAGGAGGAAGCCACGTTTTGCGTTTAGTCGCCACCCAAAAAAAACCCTCA AGTCTTCTTCTTCTTCCTCAATCTCTCCACCTCTTTTCAAACCTTCTTCACACTCTCTCT CAATCAATCCTTTTTCTTCTCAAATCTTTCAGTTTTGATCTCTAAATTTCCAGAAAATGA GCAACGATAAGGACAGTTTCAATGCCAGCGATCTCACTTCGGGAAAATCAATATCTCCGA TTTTGTTTCTGCGGCTTTGCTTCTTCTTAGTCAAAGGTTTAAAAGCTTTTTTGTTTGGTT GCAGCTCTAAAAAATGAGGATCGAGCTGGTCTTGTCAACGCTCTTAAGGGGAGATTCCCA ATCCCTTCTGATATCGATTGGCATTATACTTGAAGAGGAACATGTAATTTGGGCGTTTCG ACATTTTATAGTTTCGGGGGAGATTTTTTTGTAACTGTAATGGGTTGGATTCACAAAACA AGCTCCAAAATCTATGGGAT |
| GenBank Accession | AL953684 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:23032440 - go to primer design |
| BLAST e Value | 1e-124 |
| Hit Clone Code (BAC ID) | MHM17 |
| Hit Gene Code | At5g56950 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | nucleosome assembly protein 1;3 |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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