SimpleSearch - Line and FST details


Line specific information

 
Line ID 354F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N433960)
Segregation Analysis 50:48:37
Confirmed for Hit At5g49040
Parent of DUPLO pair none
Parent of pair(s) 84815, 84840, 84847, 84852, 84860, 84862

Gene hit At5g49040

 
Sequence (A. th genome BLAST matches underlined) 
>94-K016365w-022-354-F12-8409
TGATCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGTAAACGTAA
AGAACGGTACTATCTTCCAATTGAAACTTAACTAACCTATGGGATCGTCCCTATAGTGAG
AATGATCTTTGACATGTTATTTCTCTGGTGTCGCACTTTAATTGTACTATTTGACGTTGA
TAGAATGATAGTTTATCGAAAGTGTGGGTGCATATACTGCAACTGTGCAACGTGCTATAT
CTATCGAGTATTAGATGAGATCACGAGTGTGACAATTATATAGGGGATGTGAATTAACGA
GTGTCTACCTATACAATACTACGTGCTATTTGATAAATCTTCTATGGTATGGAATTGATC
GATGAGTAGGACGTAGTGGAATGCTCCGGTTTGCTCATGACCGCACCGCATATTTTAAAT
GGGACTCCCACATATCAACTGTGCTTAATCTGCTCCATAATACTATGAGATCTCTCTTAT
GGGGAGTATAAGGATGACACAGCTTCACAACCAAAGATGACTGCAGCTACTTCTCGTAAT
ATACTGGAAGTGTGGAACGCCATCTTACATATCTCTACGGTGCTGAATGCTCCAATCCCG
ATGATCTTATTATACGATGGGATCTCCCCCCCCAATGAGATCTCCCCAAATTGGGGAGAC
NTTNTCCCACATATTTACGTAATCCGTAGGGGATTCTCCCCAAATGGAAGACCTTTTCCC
GAAGATTGGATTGAAATGAACACCTCTCCAGGGAATTCTCAAGCCAAACCCACTTTCTGT
TTCCCTGAAGTCGGGTAACCTAAACCTCCCTTCCCTCCCTCCCAAATATTTTGTCTCACA
AC
GenBank Accession AL953810 [GenBank]
Graphic View Graphic view of gene At5g49040
Predicted Position of Insertion Chr5:19883175 - go to primer design
BLAST e Value 2e-61
Hit Clone Code (BAC ID) K19E20
Hit Gene Code At5g49040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance-responsive (dirigent-like protein) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL953810 [GenBank] AL953810 [GenBank]


Last Updated on 10.06.2021 13:37