SimpleSearch - Line and FST details


Line specific information

 
Line ID 355B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N434007)
Segregation Analysis 50:50:35
Confirmed for Hit At5g54400
Parent of DUPLO pair 2623
Parent of pair(s) none
Note

Gene hit At5g54400

 
Sequence (A. th genome BLAST matches underlined) 
>82-K016831-022-355-B11-8409
CATTGAAATCTTATCATCGATGGGGAAGACAACGAATGGAACAGGAGACTGGGCTCATAT
CTACGCATATCTACGAGGATCGAGCAAAAACACACACTCATCTTCCTGATACTCAACGCG
ATTGCTTTCTCTATACTCTCCACCGTCTTTGTCATCTACTTTAACCCGATCTGCGTCTTC
TTTCAATCGTTTCTCTTCTCTAACGCCGCGGCAGCTATGGGATCTCNCCTTAATAGTGAG
GenBank Accession BX001329 [GenBank]
Graphic View Graphic view of gene At5g54400
Predicted Position of Insertion Chr5:22090661 - go to primer design
BLAST e Value 8e-98
Hit Clone Code (BAC ID) GA469
Hit Gene Code At5g54400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g66030

 
Sequence (A. th genome BLAST matches underlined) 
>82-K016870-022-355-B11-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACAAAAGAAATTGAACTCTTATCATCGTT
GGTGAAGATACGAATAGGAAAGTACAGTGGGATCTGATCTACACTCTCTACTGGACTTCG
AGCCAAAAACATAATCACATCTACCTGATACGTAAACGCACATTGCTTTATCTATAGATC
TGCAACCGTGTTTGTCATCTACTATAACCAGATCTGCATGGGATTTCATCCGTTTCTCGT
CTCTAGGGCCGCGGCAGCTACAAAGAGGTCCTCCCCTTGATGGAAACCTAGCCCGAATAC
GGATCTAACTGTTGAACCGTCTAAAACTAATGTATAGTGCGCTGCTATTAGCGGCGGACA
TCAACAGCTACTTGGCCTGAGCCTGACCCTGGGTGATAATACAGATGGCATCTCGTGTAA
GAAGTTGCAGAAGAGGTGAACGCGACATTAATATCATACTGTTACTGCAATGATATCTCC
AAATAGTGAGCTTGNTATTGGCACTCCTTAGTTGTTGCCTCTCCGCATCCATTGCTTTAA
GTGCTTCATTCGCCTGTTGCCTATGGGATC
GenBank Accession BX001330 [GenBank]
Graphic View Graphic view of gene At5g66030
Predicted Position of Insertion Chr5:26408498 - go to primer design
BLAST e Value 1e-31
Hit Clone Code (BAC ID) K2A18
Hit Gene Code At5g66030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Golgi-localized GRIP domain-containing protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37