SimpleSearch - Line and FST details


Line specific information

 
Line ID 356B07
Vector Used pAC161
Line Availability available as T3 set from NASC (N434099)
Segregation Analysis 72:68:56
Confirmed for Hit At5g26010
Parent of DUPLO pair 2685
Parent of pair(s) none

Gene hit T1K7

 
Sequence (A. th genome BLAST matches underlined) 
>50-K016871-022-356-B07-8409
TTTCCCGGACTGAAGCCTTTACATGTAGATTATTTATTCTGTGGTAAATCTGTAAATACA
TAAATCTAATTTAAAAAAATTCAATAACTCAGGTTGAATCTAAATAGTAAAATAGACATT
ATGGCAGGTTTAACACTAAAACCAAAAACATTTAAGTCATATTGAATCCAAATAGTAACA
TAAACCACTAAACTTTAAGTCATTGGCCTCATGGTCAAGTGATCATTACGTTTATACGTC
ATACTCATATGTATCCATTTTTTACGTTTATACATACACAAGATGTATTTATTATAGTCA
GAACATTAAGAAGAAGTCGTTTGAAGAAGAGGTCACATCAAAGACTTGTTCTAAAACAGA
AGATTCTGAACTGAGAAAAAACAAAAAACAAAAAAACTCAGATTGAAACGGATCTGGGAG
GGTTCCAAGGATAAGATTTGAACTCTCCTATGGGAT
GenBank Accession BX001449 [GenBank]
Graphic View Graphic view of sequence BX001449 of line 356B07
Predicted Position of Insertion Chr1:9141040 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T1K7
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g26010

 
Sequence (A. th genome BLAST matches underlined) 
>50-K016833-022-356-B07-8409
TATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATAAAGTTTATATATAA
AGTTAAAATTACATTCATTTCACATGACATTTCTCACGCAGATTGAAAAATGTATTTAAA
GTTTCATCTATCTTATTATTGAGTAGAATTAAGTGAACTGATTAGATTTAAATAGTAGAA
ATTGTTTAATTTTAATCCCGTAGGGATATGGAACAAGAGATACAGAGCTATGTGGAGTGT
TTGATGGACACGGCAAAAATGGGCACATGGTGAGCAAAATGGTGAGGAATAGATTGCCAT
CGGTTTTGTTAGCACTAAAGGAAGAGCTAAACCAAGAATCTAATGTTTGTGAAGAAGAAG
CTTCAAAATGGGAAAAGGCTTGTTTTACTGCCTTTAGACTCATTGATAGAGAGCTTAATC
TTCAAGTCTTTAATTGCTCTTTCAGTGGCTCCACTGGTGTGGTTGCCATAACTCAGGTAC
ATTTATTTTCTCTGTTTCCCCGCAACTTTTAAAAAGGGTTTGAATGGTGGTAACGGACCA
TTCAATTCTGTGGCCAACAGACAAGATTAGTGTTTCTTCTTCTGCTGCAAGTTTTGTTTT
TTCTTGGTATGCACCAATATAGACCTAAACTTATGAATAGTGACAAAAAGCTAATGTCTA
T
GenBank Accession BX001448 [GenBank]
Graphic View Graphic view of gene At5g26010
Predicted Position of Insertion Chr5:9086950 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T1N24
Hit Gene Code At5g26010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein phosphatase 2C family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37